Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1723 |
Symbol | |
ID | 4686728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1827624 |
End bp | 1828403 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639834727 |
Product | regulatory proteins, IclR |
Protein accession | YP_981957 |
Protein GI | 121604628 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.270095 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAAAC CCGACAGCGA CCTTCCCGTC AAACCGACCG TCCAGGTGAT TGAACGCATG TTCACCCTGC TTGAAATTCT GGCCGCCCAT GAAGAAGCCG TTTCCCTCAA GGAAATCAGC GAGAAATCCG GCCTTCACCC TTCGACAGCG CATCGCATCC TGAACGATCT GGCCACGGGC CGTTTCGTGG ACCGGCCAGC GGCAGGCAAC TACCGGCTGG GCATGCGTCT GCTTGAACTG GGCAACCTGG TCAAGGCACG CCTGAATGTC CGTGATGCGG CCCTGATCCC CATGCGAGAA CTGCACAAGC TGACACAGCA GCCGGTCAAT TTAAGCATGC GCCAAGGCGA TGAAATCCTG TACGTCGAAC GCACGTACAG CGAACGCTCC GGCATGCAGG TGGTACGGGC TATCGGCGGC AGGGCGCCGC TGCATCTGAC GTCGGTGGGC AAGCTGTTTC TGGCCTCTGA CGACCCCCAG CGCCTGCGTG CCTACGCGAC ACGCACCGGC CTGCCCGGCC AGACGCGCAA CAGCATCACC GAGCTAGCTG TTCTGGAGCG TGAACTGTCA AAAGCGCGTC AATATGGCAT TGCACGCGAC AACGAAGAAC TGGAACTGGG CGTTCGCTGC ATGGCTGCCG GCATTTATGA CGACCAGAAC AAACTGGTGG CCGGCCTGTC AATTTCAGCA CCCGCCGACC GGCTGGATGA AAGCTGGCTA CCCAAGTTGC AGGCAACAGC CAATGAAATA TCGTCAGCGC TTGGCTACAC TTTAAGGTAA
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Protein sequence | MIKPDSDLPV KPTVQVIERM FTLLEILAAH EEAVSLKEIS EKSGLHPSTA HRILNDLATG RFVDRPAAGN YRLGMRLLEL GNLVKARLNV RDAALIPMRE LHKLTQQPVN LSMRQGDEIL YVERTYSERS GMQVVRAIGG RAPLHLTSVG KLFLASDDPQ RLRAYATRTG LPGQTRNSIT ELAVLERELS KARQYGIARD NEELELGVRC MAAGIYDDQN KLVAGLSISA PADRLDESWL PKLQATANEI SSALGYTLR
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