Gene Pnap_1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1723 
Symbol 
ID4686728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1827624 
End bp1828403 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID639834727 
Productregulatory proteins, IclR 
Protein accessionYP_981957 
Protein GI121604628 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.270095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAAAC CCGACAGCGA CCTTCCCGTC AAACCGACCG TCCAGGTGAT TGAACGCATG 
TTCACCCTGC TTGAAATTCT GGCCGCCCAT GAAGAAGCCG TTTCCCTCAA GGAAATCAGC
GAGAAATCCG GCCTTCACCC TTCGACAGCG CATCGCATCC TGAACGATCT GGCCACGGGC
CGTTTCGTGG ACCGGCCAGC GGCAGGCAAC TACCGGCTGG GCATGCGTCT GCTTGAACTG
GGCAACCTGG TCAAGGCACG CCTGAATGTC CGTGATGCGG CCCTGATCCC CATGCGAGAA
CTGCACAAGC TGACACAGCA GCCGGTCAAT TTAAGCATGC GCCAAGGCGA TGAAATCCTG
TACGTCGAAC GCACGTACAG CGAACGCTCC GGCATGCAGG TGGTACGGGC TATCGGCGGC
AGGGCGCCGC TGCATCTGAC GTCGGTGGGC AAGCTGTTTC TGGCCTCTGA CGACCCCCAG
CGCCTGCGTG CCTACGCGAC ACGCACCGGC CTGCCCGGCC AGACGCGCAA CAGCATCACC
GAGCTAGCTG TTCTGGAGCG TGAACTGTCA AAAGCGCGTC AATATGGCAT TGCACGCGAC
AACGAAGAAC TGGAACTGGG CGTTCGCTGC ATGGCTGCCG GCATTTATGA CGACCAGAAC
AAACTGGTGG CCGGCCTGTC AATTTCAGCA CCCGCCGACC GGCTGGATGA AAGCTGGCTA
CCCAAGTTGC AGGCAACAGC CAATGAAATA TCGTCAGCGC TTGGCTACAC TTTAAGGTAA
 
Protein sequence
MIKPDSDLPV KPTVQVIERM FTLLEILAAH EEAVSLKEIS EKSGLHPSTA HRILNDLATG 
RFVDRPAAGN YRLGMRLLEL GNLVKARLNV RDAALIPMRE LHKLTQQPVN LSMRQGDEIL
YVERTYSERS GMQVVRAIGG RAPLHLTSVG KLFLASDDPQ RLRAYATRTG LPGQTRNSIT
ELAVLERELS KARQYGIARD NEELELGVRC MAAGIYDDQN KLVAGLSISA PADRLDESWL
PKLQATANEI SSALGYTLR