Gene Pnap_1718 details

Gene Information

• Locus tag: Pnap_1718
• Symbol: ilvH
• ID: 4686907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas naphthalenivorans CJ2
• Kingdom: Bacteria
• Replicon accession: NC_008781
• Strand: +
• Start bp: 1821774
• End bp: 1822265
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 639834722
• Product: acetolactate synthase 3 regulatory subunit
• Protein accession: YP_981952
• Protein GI: 121604623
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0440] Acetolactate synthase, small (regulatory) subunit
• TIGRFAM ID: [TIGR00119] acetolactate synthase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0129853
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 24
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAACACA TCATTGCAGT TTTGCTGGAA AACGAGCCGG GCGCTCTTTC CCGCGTCGTC 
GGCCTGTTTT CAGCGCGTGG CTACAACATC GAGAGCCTGA CCGTCGCGCC GACTGAAGAC 
CCGACGCTGT CTCGCATGAC AATCCAGACC TCGGGTTCGG ACGACGTGAT CGAGCAGATC 
ACCAAGCACC TGAACCGCCT GATCGAAGTG GTCAAGGTGG TCGATTTGAC AGAAGGCTCC 
TACACCGAGC GCGAGCTGAT GATGGTCAAG GTGCGCGCGG TCGGCAAGGA ACGCGAAGAG 
ATGAAGCGCA TGGCTGATAT ATTTCGCGGT CGGATTATCG ACGTGACTGA AAAGAGTTAC 
ACGATTGAAC TGACGGGCGA CCAGACCAAG AACGATGCGT TTCTGGAAGC GATTGACCGC 
AGCGCCATTC TTGAAACCGT GCGAACCGGT TCAAGCGGAA TCGGCCGTGG CGAGCGGATT 
CTGCGGGTTT GA 

 

Protein sequence

MKHIIAVLLE NEPGALSRVV GLFSARGYNI ESLTVAPTED PTLSRMTIQT SGSDDVIEQI 
TKHLNRLIEV VKVVDLTEGS YTERELMMVK VRAVGKEREE MKRMADIFRG RIIDVTEKSY 
TIELTGDQTK NDAFLEAIDR SAILETVRTG SSGIGRGERI LRV