| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1717 |
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| Symbol | |
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| ID | 4686899 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1819887 |
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| End bp | 1821665 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834721 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_981951 |
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| Protein GI | 121604622 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0366089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA CAAAAGCGGA AATTGCTTCC GCAGCGGCAA CATCTGCCCA AACCAACCCT
CAGGATCTGC GGGGCGCTGA AATCCTCGTA AAAGCGCTTC AGGCCGAAGG TGTCAAGTAC
ATCTGGGGCT ATCCCGGCGG TGCGGTTCTT CATATTTACG ACGCCTTTTA CAAGCAGGAC
TCGATCCAGC ATGTGCTGGT GCGCCACGAG CAGGCCGCAG TACATGCCGC CGATGGTTAT
GCCCGCGCCA CTGGCGATGT TGGCGTTGCG CTGGTCACTT CCGGCCCTGG CCTGACCAAT
GCTGTGACCG GGATTGCAAC GGCCTACATG GACAGCATCC CCATGGTCAT CATCAGCGGC
CAGGTACCGA CCGCCGCCAT TGGCCTGGAT GCCTTCCAGG AATGCGATAC CGTCGGTATC
ACCCGCCCGA TCGTCAAGCA CAACTTCCTG GTCAAGGATG TACGGGACAT GGCCGAGACC
ATGAAAAAGG CTTTCCATAT CGCCCGCACC GGCCGGCCTG GTCCTGTGGT GGTCGATGTG
CCCAAGGATG TCTCGTTCAA CAAGACCCTG TATACCGGCT ACCCGAAGAG CGTTGAAATG
CGCTCCTACA ACCCGGTTCG CAAAGGCCAT GCCGGGCAGA TCCGCAAAGC CTTGCATCTG
CTGATGGCGG CCAAGCGGCC CTATATTTAC ACTGGCGGCG GCGTATTGCT CAGCAACGCT
TCGCAAGAGT TGCGCACGCT GGTGGACATG CTGGGTTACC CATGTACCCA TACGCTGATG
GGCCTGGGCG CCTACCCGGC CAGCGACAAG AAGTTTCTCG GCATGCTGGG CATGCATGGC
ACGCTCGAAG CCAACAACGC CATGCAGAAT TGCGACGTGC TGCTAGCTGT CGGCGCGCGT
TTTGATGACC GTGTGATTGG CAACCCCAAG CACTTCGCCC AAAACGAACG CAAGATCATC
CACATCGACA TCGACCCGTC GAGCATTTCC AAGCGCGTGA AAGTCGATAT TCCCATCGTG
GGCGATGTCA AGGATGTGCT GACCGAACTG ATCGCCATGA TTCGCGAATC GGGCCTGAAG
CCTGACGCCG ATGCGCTGGG CGGCTGGTGG AGCACGATTG ACGAGTGGCG CAAGCGGGAC
TGCATGAAGT ACAGCCTGGG CACCGGCGAC GTGATCAAGC CGCAGTATGT GGTCGAGACG
CTCTGGAACA TGACCAAGGA CGCCGACACC TACATCACCT CGGATGTCGG CCAGCACCAG
ATGTGGGCCG CGCAGTACTA CAAGTTCGAC GAGCCGCGCC GCTGGATCAA TTCCGGCGGT
CTGGGCACCA TGGGCGTCGG CATTCCCTAT GCCATGGGCA TCAAGCTGGC CAAGCCGGAC
TCGGAAGTGT TCTGCATTAC CGGCGAAGGC TCGGTGCAGA TGTGCATCCA GGAGCTTTCA
ACCTGCCTGC AGTACAACAC GCCGATCAAG ATCGTGTCGC TCAACAACCG CTACCTGGGC
ATGGTGCGCC AGTGGCAGGA AATCGAATAT GCCGGCCGCT ACAGCAGCAG CTACATGGAT
GCACTGCCCA ATTTCGTGAA GCTCGCCGAA GCCTATGGCC ATGTCGGCAT GCTGATCGAA
AAGCCGCAGG ATGTGGAGCC TGCACTGCGC GAAGCGCGCA AGCTCAAGGA CCGTACCGTG
TTCATGGATT TCCGCACCGA CCCGACGGAA AACGTGTTTC CGATGGTCAA GGCCGGCAAG
GGCATCACTG AAATGCTGCT CGGGTCCGAA GACCTCTGA
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| Protein sequence | MEITKAEIAS AAATSAQTNP QDLRGAEILV KALQAEGVKY IWGYPGGAVL HIYDAFYKQD
SIQHVLVRHE QAAVHAADGY ARATGDVGVA LVTSGPGLTN AVTGIATAYM DSIPMVIISG
QVPTAAIGLD AFQECDTVGI TRPIVKHNFL VKDVRDMAET MKKAFHIART GRPGPVVVDV
PKDVSFNKTL YTGYPKSVEM RSYNPVRKGH AGQIRKALHL LMAAKRPYIY TGGGVLLSNA
SQELRTLVDM LGYPCTHTLM GLGAYPASDK KFLGMLGMHG TLEANNAMQN CDVLLAVGAR
FDDRVIGNPK HFAQNERKII HIDIDPSSIS KRVKVDIPIV GDVKDVLTEL IAMIRESGLK
PDADALGGWW STIDEWRKRD CMKYSLGTGD VIKPQYVVET LWNMTKDADT YITSDVGQHQ
MWAAQYYKFD EPRRWINSGG LGTMGVGIPY AMGIKLAKPD SEVFCITGEG SVQMCIQELS
TCLQYNTPIK IVSLNNRYLG MVRQWQEIEY AGRYSSSYMD ALPNFVKLAE AYGHVGMLIE
KPQDVEPALR EARKLKDRTV FMDFRTDPTE NVFPMVKAGK GITEMLLGSE DL
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