Gene Pnap_1711 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1711 
Symbol 
ID4686969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1816141 
End bp1816752 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID639834715 
Producthypothetical protein 
Protein accessionYP_981945 
Protein GI121604616 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID[TIGR00730] conserved hypothetical protein, DprA/Smf-related, family 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCTG AAACCACAAG CATGAATAAA CCTTCCTTTT CCCTGTGCGT GTACTGCGGC 
TCGCGCCCCG GCAACAGCCC CGAATTTGCA GCGGTGGCGC GTGAAGTCGG CGCCTGGATA
GGCCGGCACG GCGGCCAGCT GGTGTATGGC GGCGGCCACA ATGGCCTGAT GGGCATCCTG
GCCGACGCGG CGCTGGCCGC GGGCGCGCGG GTGGTGGGCG TGATTCCGAA GGCGCTGGTC
GAAAAGGAAT GGGCGCATAC CGGCTGCACC GAACTGCACA TCGTGGAGAA CATGCACGAG
CGCAAACGCA TCATGGCCGA GCATGCCGAT GCCTTTCTGG CCCTGCCCGG CGGCATCGGC
ACGCTTGAAG AATTCTTTGA GGTCTGGACC TGGCGCCAGC TTGGCTACCA CGACAAGCCG
GTGGGCCTGC TCAACATGGA CGGCTTTTAC GACAGCCTGC TGACCTTTCT CGACTCGGCG
GTCAGCACCG GCTTCATGAA TGAATGGCAG ATGGGGCTGA TCCGCACCGG CAGCGATGCG
CAAGCGCTGA TGGAGCAACT GGTGCAAGAG GCCGGCCTTG CAGCACAGCC CCTGCGGCTT
GACCAGATTT AA
 
Protein sequence
MNPETTSMNK PSFSLCVYCG SRPGNSPEFA AVAREVGAWI GRHGGQLVYG GGHNGLMGIL 
ADAALAAGAR VVGVIPKALV EKEWAHTGCT ELHIVENMHE RKRIMAEHAD AFLALPGGIG
TLEEFFEVWT WRQLGYHDKP VGLLNMDGFY DSLLTFLDSA VSTGFMNEWQ MGLIRTGSDA
QALMEQLVQE AGLAAQPLRL DQI