Gene Pnap_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1704 
Symbol 
ID4687575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1809797 
End bp1810504 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content63% 
IMG OID639834708 
Producthypothetical protein 
Protein accessionYP_981938 
Protein GI121604609 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.45416 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTTC AAAAAACCAG TCCATCCTTG AATGGATCAA GCGCATTCCC TGAGGTGTCC 
GGGCAGCAGA TCGAGGCCGC CCGCTATGCC GTGTTGAGGC GCCTGGCGCC TTGTCTGCGT
CACCACATGG TGCGGCCGCT GCAACCGATT GGCCTGATTT ACGGCGTCAT GCAGCACAAG
CTTTCCGCTG CAAATCCCGA CTTGCAGTCG GTGCGCGAAG AGGCCGACAA GATCAACGGG
TTTGCCAGGG CCGCGCTCGA TGAGTGCAAT GACATGAGCA CCTGGCTGGC GCCCGAGCCG
GGCGTTTTGA CCGGGGTGGA CGCGGGCATC AGGGAGTGCG TGGGCCTGCT GGCCACCATG
CTGCATTTTT GCGGCTTTCG CTTGGACAAT GAGGTTGACG AGATGCCGGT CCAGGTGCAG
CGCGATGCCG TGCGGATGGT CTTGAGCGCC GCACTGCTTG CGCTGACCGA TTCAATGACC
GAGCCGGCCA GCCTCCTGAT CACCGCTGTC GCCAGCCAGG CTGAAGTCGC CGTTTCCCTG
CAGGTCAGCC CGGCAGGCGA AGGCCAGGTG GACCGCTATG ACGACAGCTA CCGAAAGCTG
GTGTGGGACG ATGTGCAGGC GCTGGCGGCT GCGGAGCATG TCAGGCTGTC CCGGCAGGAG
CGCCTGGTCA CGCTGCGCTT TGCCGTCGAG ACAGCGCCAG TCCATTAA
 
Protein sequence
MRVQKTSPSL NGSSAFPEVS GQQIEAARYA VLRRLAPCLR HHMVRPLQPI GLIYGVMQHK 
LSAANPDLQS VREEADKING FARAALDECN DMSTWLAPEP GVLTGVDAGI RECVGLLATM
LHFCGFRLDN EVDEMPVQVQ RDAVRMVLSA ALLALTDSMT EPASLLITAV ASQAEVAVSL
QVSPAGEGQV DRYDDSYRKL VWDDVQALAA AEHVRLSRQE RLVTLRFAVE TAPVH