Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1700 |
Symbol | |
ID | 4688097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1801436 |
End bp | 1802152 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639834704 |
Product | GntR family transcriptional regulator |
Protein accession | YP_981934 |
Protein GI | 121604605 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00690032 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCC TAGCGAAAGT TGCTCCGCTC AAACTTGACC GTACCCGCCA GTCCGCCCCG CAGGTTTTCG AAGCCTTGCG TGAATTGATC GTGTCGGTGC AACTCGAACC CGGCACGGTG CTGCAGCGCG CGGAACTGGC GGACCACTTC GGCATCAGCC AGACGCCTAT CCGCGACGCC CTGCTGCGCC TGGGCGAAGA GCAGCTGGTG GACATCTTTG CGCAACATGC CACGGTGGTC AGCCGCATTG ACCTGTCGGC GGCGCTGCAG GCGCATTTCC TGCGGCGGTC GATTGAACTG GAAATACTGG CGACGCTGTG CAAACTGCCC GATGCGGAGC ACCAGCAACT GATGCAGCGC CTGAACGCGA ATCTGGCGGA GCAGGAAGCC GCGCTCAAGC CGCTGGATGT CTCGAAGCTG GCTCTGGCCG ATCAGGCCTT TCATCGGGAA ATGTACGAGG CCGCCAGGGT GGGGCCGCTG TGGAACCTGG TGCGCAAGCA AAGCGGGCAT GTGGACCGGC TGCGCCGCCT GCACCTGCCG GACGAAGGCA AGCCGCAGGC GATTGTGCGG GACCATGGCG CCATCGTCGA AGCCATTGCC CGCAAGGACG CGCAAGCTGC TGAAAAGGCG CTGCGCCAGC ATCTGGCGGG AACACTCGCC TTTGTCGATG ACATCAGGCA GCGCTACCCG GACTGGATTG TTTCGGATGC GCGCTGA
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Protein sequence | MNALAKVAPL KLDRTRQSAP QVFEALRELI VSVQLEPGTV LQRAELADHF GISQTPIRDA LLRLGEEQLV DIFAQHATVV SRIDLSAALQ AHFLRRSIEL EILATLCKLP DAEHQQLMQR LNANLAEQEA ALKPLDVSKL ALADQAFHRE MYEAARVGPL WNLVRKQSGH VDRLRRLHLP DEGKPQAIVR DHGAIVEAIA RKDAQAAEKA LRQHLAGTLA FVDDIRQRYP DWIVSDAR
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