| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1698 |
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| Symbol | |
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| ID | 4687874 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1797909 |
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| End bp | 1799648 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639834702 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_981932 |
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| Protein GI | 121604603 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.471971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA AAACCTACGC GGAACTGCGC AGCGCGCGCT GGTTCGCCCC CGACGATGTG
CGCTCCTTCG GCCACCGCTC GCGCGTGATG CAGCTGGGCT ACGGCCCGCA GGACTGGGAA
GGCAAGCCGG TCATCGCCAT CATCAACACC TGGAGCGACA TCGGCACCTG CCACGGCCAC
TTCAAGCAGC GCGTCGAAGA CGTGAAACGC GGCGTGCTGC AGGCCGGCGG CTTCCCGCTG
GAACTGCCGG CCCTGTCGCT GTCCGAATCG CTCGTCAAGC CGACCACCAT GCTGTACCGC
AACATGCTGG CGATGGAGGT CGAGGAACTG CTGCGCAGCC ACCCCATCGA CGGCGCGGTG
CTGATGGGCG GCTGCGACAA GACCACGCCC GGCCTGGTGC TGGGCGCGCT GAGCGCCGGC
GTGCCTTTCA TCTACATGCC CGCCGGCCCG ATGCTGCGCG GCAATGTCAA GGGCAAGGTG
CTGGGCTCGG GCTCGGACAC CTGGAAATAC TGGGACGAGC GCCGCGCCGG CAAGATCAAC
GCGACGCAGT GGCTCGAAGT CGAAGGCGGC ATTGCGCGCA GCCACGGCCA CTGCATGACC
ATGGGAACGG CCAGCACCAT GACCGGCATT GCCGAAGCCA TTGGCCTGAG CCTGCCCGGC
GCCTCGTCGA TTCCGGCGGT CGATTCCAAC CACATCCGCA TGGCCACCGA ATGCGGTCGC
CGCATCGTCA GCATGGTCTG GGAAGACCTG ACCCCCGCCA GGATGCTGTC GCGCGCCTCG
TTCGAGAACG CCATCACGGT CGCCATGGCG ATGGGCTGCT CGACCAACGC CATCATCCAT
CTGGTGGCGA TGTCGCGCCG CGCCGGTGAA CACTGCGCCG TCGGCCTGGA CGACTTCGAC
GCGGCCAGCC GCCGCGTGCC GGTGATTGCC AACATCCGGC CCAGCGGCGA CACCTACCTG
ATGGAAGATT TCTATTACGC CGGCGGCATG CTCGGCATGA TGAGCGTGCT CAAGGACCAC
CTCAAGCTTG ATGCGCTGAC CGTCACCGGC AAGCCCCTGG GCGACAACCT GGTGGGCGCC
GAGGTCTATA ACCACGACGT GATCCGCCCG CTCGACAACC CGATCTATGC CCAGGGCGCG
CTGGCCGTGC TGCGCGGCAA CCTGGCACCC GACGGCTGCG TGATCAAGCC CAGCGCCTGC
GCGCCGCAGT TTTTCCAGCA CACCGGCCCG GCGCTGGTGT TCGACGACTA CCCGTCGATG
AAAGCCGCCG TCGACGACGA GAACCTCGAC GTGACCGCCG ACCACATCAT GATCCTGCGC
AACGCCGGCC CCCAGGGCGG ACCCGGCATG CCCGAGTGGG GCATGCTGCC GATTCCGCTC
AAGCTGGTCA AGCAGGGCGT CAAAGACATG CTGCGCATCT CGGATGCGCG CATGAGCGGC
ACCAGCTACG GCGCCTGCAT CCTGCACGTC GCGCCCGAGG CCTATATCGG CGGCCCGCTC
GCGCTGGTGA AAACCGGCGA CCTGATCAGC GTCGATGTGC CGGCGCGCAG CATCCACCTC
GAAGTCAGCG ACGACGAACT GGCGCTGCGC CGCGCCGCCT GGACAGCGCC GCCCAAGCGC
TTCGAGCGTG GTTACGGCTG GATGAGCGCG CGCCACATCC AGCAGGCCGA CACCGGCTGC
GATTTTGATT TTCTTGAAAC CTCGTTCGGC GCGCCCATCG GCGAGCCCGA CATCTATTGA
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| Protein sequence | MTKKTYAELR SARWFAPDDV RSFGHRSRVM QLGYGPQDWE GKPVIAIINT WSDIGTCHGH
FKQRVEDVKR GVLQAGGFPL ELPALSLSES LVKPTTMLYR NMLAMEVEEL LRSHPIDGAV
LMGGCDKTTP GLVLGALSAG VPFIYMPAGP MLRGNVKGKV LGSGSDTWKY WDERRAGKIN
ATQWLEVEGG IARSHGHCMT MGTASTMTGI AEAIGLSLPG ASSIPAVDSN HIRMATECGR
RIVSMVWEDL TPARMLSRAS FENAITVAMA MGCSTNAIIH LVAMSRRAGE HCAVGLDDFD
AASRRVPVIA NIRPSGDTYL MEDFYYAGGM LGMMSVLKDH LKLDALTVTG KPLGDNLVGA
EVYNHDVIRP LDNPIYAQGA LAVLRGNLAP DGCVIKPSAC APQFFQHTGP ALVFDDYPSM
KAAVDDENLD VTADHIMILR NAGPQGGPGM PEWGMLPIPL KLVKQGVKDM LRISDARMSG
TSYGACILHV APEAYIGGPL ALVKTGDLIS VDVPARSIHL EVSDDELALR RAAWTAPPKR
FERGYGWMSA RHIQQADTGC DFDFLETSFG APIGEPDIY
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