Gene Pnap_1697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1697 
Symbol 
ID4687878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1797177 
End bp1797893 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content66% 
IMG OID639834701 
Producthypothetical protein 
Protein accessionYP_981931 
Protein GI121604602 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0684] Demethylmenaquinone methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTCA GCCCCGCCAC CCGAGACAAG CTCAAGACCG TCAGCACCGC CACGCTGTGC 
ACGGCCCTGT TCAAGCGCGG CCTGCGCAAC CAGTTCATCC AGGACGTGCA TCCGGTCAAT
CCCAGCCTGC CGACCATGGT GGGCGAGGCC TTCACGCTGC GCTACATTCC GGCGCGTGAA
GACCTGAACC CGATCAGCGT TTTTCAAGAC CCGAATCACC CGCAGCGCGT GGCCGTCGAG
CAGTGCCCCG AAGGCGCCGT GATGGTGATC GACAGCCGCA AGGATGCGCG CGCCGCCTCG
GCCGGCTCGA TCCTGATCTC GCGCCTGATG GTTCGCGGCG CCGCCGGCAT GGTCACCGAT
GGCGGCTTTC GCGACACGCC AGAACTGGCC GCGCTGCCCT TCCCCACCTA CCACCAGCGG
CCTTCGGCAC CAACCAACCT GACGCTGCAC CAGGCGCTGG ACATCAACGT GCCGATTGGC
TGCGGCGACG TAGCGGTGTT CCCCGGCGAC GTGATCGTCG GCGACCAGGA AGGCGTGTTC
GTGATCCCGG CGCACCTGGC CGACGAAATT GCCGACGAGG CGGTGGAGAT GACCGCCTTC
GAGGACTTCG TGACCGAGGA AGTGCTCAAG GGGCGGCCCA TCATCGGCCT GTATCCACCG
ACCCTGCAGC AATCGAAGGA CGACTTCGCG GTCTGGCGCA AGGCTAAAAA CCGCTGA
 
Protein sequence
MALSPATRDK LKTVSTATLC TALFKRGLRN QFIQDVHPVN PSLPTMVGEA FTLRYIPARE 
DLNPISVFQD PNHPQRVAVE QCPEGAVMVI DSRKDARAAS AGSILISRLM VRGAAGMVTD
GGFRDTPELA ALPFPTYHQR PSAPTNLTLH QALDINVPIG CGDVAVFPGD VIVGDQEGVF
VIPAHLADEI ADEAVEMTAF EDFVTEEVLK GRPIIGLYPP TLQQSKDDFA VWRKAKNR