| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1690 |
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| Symbol | |
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| ID | 4688359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1789189 |
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| End bp | 1790337 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639834694 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_981924 |
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| Protein GI | 121604595 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.783096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.235233 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCGAA CACCCAAAAT TTTTTTGTCC ATGGCCTGCG GGCTTTTTTT ATGCGCGTCT
GCTCCGGCGC GGGCAGCCGA AGTGGTGTTT GCTCAAATCG CATCCCAAAG CAATCCGGCC
TCCATCGACA ATGCCAAAGG GCTGACGACA GGTATCCAGG TCTATTTTGA AGCGCTCAAT
GCCAAGGGTG GCGTTAACGG CAACAAGCTC AAGCTGGAAG TGCATGACGA CGGCCTTCAA
GCCAAGAACA TGGTGGAACT GACCGGCAAG CTGATTGACA ACCCGGCCAT CGTGGGCCTG
GTGGGCTTTC TCAATACGGC GGGCATGACC ATGCTGGCCA AGGAGAACGC CTTCGGTAAA
GGCGCAATAG CGCTGATTGC ACCGATGCAG GGCGACAAGA ATGTGGTCGA GGCCGACAAC
GTCTTCCCCT TGCGCAGCGG CTATGCCGAT GAAATCGATG CCCTGCTGAA AGAAGCCAAG
ACCTGGGGCA AGGACACTGT CTCCATCGTC AACATGAATA TCGCCTTTGG TCCCATCCTG
GCTGAACTGG CACAAAAACG CGCCACCGAC CTGGGACTCA AGGTGGTGTC CCGCTCCGTT
GTGGATTTCA GTCCTGATGC GCAAGCCGCC AGCGTCAGCG CAGCCGTCAA GTCTGTTGTG
GCGGCCCATC CCAAGGCCAT CTTGGTGCTG GCGGCGGGCA TGCCGGCATT TGAATTCATC
AAGGCGGTTC GCGCCGTGCC CGAAGGCCTG GGGCAGATTT ATGGACTGTC TGTTTTGCGG
CACAGCGACT TGATTGCGAT CACCGGCGTG AACAAGGCGC GCGGCATTGT GTTGAGCCAG
GCCACGCCCT ATCCCTTTAC CTCCACCAAA CCCGTCATCA CCGAATACCA GGCCGCCATG
AAGGCTCACG ACCCCAAGGC AGCCTTGTCG TTTTCCAGCC TGGAAGGCTT TTTGGGCGCC
AAGATCGCGG CAGAAGCTGT CCGGCGGGCT GGCGCGAACC CCAGCCGGGA GCGGGTGCTT
GGGGCATTGA AAACCATGCA GGAATACAAC CTCGGCGGCA TTTCCGTCAA CTACAGCGCC
CAGGCCCGCA AGGGCTGGGG CGGCGTTGAC TTGACCATCA TCAGCGCCAC CGGCAACCTG
CAAAAGTAA
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| Protein sequence | MRRTPKIFLS MACGLFLCAS APARAAEVVF AQIASQSNPA SIDNAKGLTT GIQVYFEALN
AKGGVNGNKL KLEVHDDGLQ AKNMVELTGK LIDNPAIVGL VGFLNTAGMT MLAKENAFGK
GAIALIAPMQ GDKNVVEADN VFPLRSGYAD EIDALLKEAK TWGKDTVSIV NMNIAFGPIL
AELAQKRATD LGLKVVSRSV VDFSPDAQAA SVSAAVKSVV AAHPKAILVL AAGMPAFEFI
KAVRAVPEGL GQIYGLSVLR HSDLIAITGV NKARGIVLSQ ATPYPFTSTK PVITEYQAAM
KAHDPKAALS FSSLEGFLGA KIAAEAVRRA GANPSRERVL GALKTMQEYN LGGISVNYSA
QARKGWGGVD LTIISATGNL QK
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