Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1682 |
Symbol | |
ID | 4689844 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1778437 |
End bp | 1781631 |
Gene Length | 3195 bp |
Protein Length | 1064 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834686 |
Product | acriflavin resistance protein |
Protein accession | YP_981916 |
Protein GI | 121604587 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.377778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAACTCG CTGAAGTCTC CATTCGCCGC CCGGTGTTCG CCACCGTGCT GTCGCTGCTG ATCGTGCTGA TCGGCGCCGT CAGCTTTAAC CGGCTGACCG TGCGCGAATA CCCCAAGATC GACGAGCCGG TCGTGACCGT GAGCGTTCGC TATGCCGGCG CGTCGGCCGA GGTGATCGAG TCGCAGGTGA CCAAGCCGCT GGAGGATTCG ATTGCCGGCA TCGACGGCGT GGACGTGATC ACCTCGATCA GCCGCGCCGA CCAGGGGCAG ATCAGCGTGC GCTTCCGGCT TGAAAAAGAC GCCGACTCCG CCGCCGCCGA AGTGCGCGAC CGCACCTCGC GGGTGCGCAA CCGCCTGCCG CAGGCCATCG AGGAGCCGGT GATCGCCAAG GTCGAGGCAG ACGCCTTTCC GGTCATCCAG CTGGCTTTTT CGAGCGAGTC GCTGACGCCG CTGCAGATCA ACGACCTGGT CAATCGCATC GTCAAGCCGC GCCTGCAAAC CGTCACCGGC GTGGCCGACG TGCGCATCTT CGGCGAGCGC AAGTACGCCA TGCGCGTGTG GCTGGACACC GACAAGCTGG CGTCCTACCG ACTGACGACG CAGGATGTCG AGGACGCGAT TCGGCGCAGC AACCTGGAGC TGCCGGCCGG GCGGATTGAA TCGCAGCAAC GCGAATTCAG CGTGACCTCG CAGACCGACC TGCTCAAGCC GGCCCAGTTT GGCGAGATCG TCATCAAGAC CGTCAACGGT TTTTCGGTCA GGGTCCGCGA TGTGGCCCGT GTCGAGGAAG GCGCTGCCGA TGAGCGCACG GCAGTCCGGC TGAACGGCCG CCCGGCGGTC GGCGTCGGCG TGATCCGCCA GGCGACGGCC AATCCGCTGG ACCTGTCCGC AGGCGTGCGG GACGTGATCC CCAAGCTCAA GGCCGACCTG CCGCCCGATG TGTTGATCGA CATCGCCAAC GACAACTCGG TGTTCATCGA CCGCTCGGTC AAGAACGTGT ACCGCACGAT TTTCGAAGCC GTGCTGCTGG TGGCGCTGGT GATTTTTGTG TTCCTGCGCA CCTTGCGCGC GTCCATCATT CCGATCATCA CGATTCCGGT CAGCCTGATT GGCACCTTTG CCTTGATGGC GCTGGCCGGC TTCACCATCA ACACGCTGAC GCTGCTGGCG CTGGTGCTGG CCATCGGGCT GGTGGTCGAT GATGCCATCG TGATGCTGGA AAACATCTTC CGGCATATCG AGGAGGGCAT GGACCCGTTC TCGGCCGGCA TCAAGGGCGC GCGCGAGATC GGTTTTGCCA TCATCACCAT GACCGCCACG CTGGTCGCGG TGTATGCGCC GCTGGCCTTC ACGCCGGGGC GCACCGGGCG GCTGTTCGTC GAGTTTGCGC TGGCGCTGGC CGGCGCGGTG GTGGTGTCGG GCTTTGTCGC GCTGACGCTC ACGCCCATGC TGTGCACCCA GCTGCTCAAG CACAACCCCA AGCCGAACCG CTTCGACCGC ACCATGGAGC GCGTGCTCAC TAGCATTTCG GAGCGCTACG GCGCGCTGCT GCGCTGGATC GTCACGGCGC GCTTTCAGCC GCCGGCCCAG GACCGCAGCA TCGGCCAGCG CATCAAGGGC TTTGTGTTCC AGGCGCGCTG GATCGTGGTG GCCGTGATGC TGGTCAGCGG CGTAGCTATT GTGCTGGTGT TCCCGACCAT GAAGCAGGAA CTCTCACCGA TGGAAGACCG GGGCGTGATC CTGGCCAGCG TCAATGCGCC GGACGGCTCG ACGCTCGACT ACACCAACCG CTACGCCCAG GCGCTGGAAA AGATGGGCCA GCCGTTCAAG GAATTCGACC GCATCTTTGC CAACGTCGGC AACCCGACGG TGGCGCAGGC CAGCGTGGTC TATCGCACGG TGGACTGGGA GGTTCGCAGC CGTTCGACCA TGGACATGGC GCGCGAACTG CAGCCCCAGT TCAATGCGCT GCCCGGCGTG ACGGCTTTTT CAATCACGCC GCCTTCGCTG GGCCAGGGCT TTCGCGAGCG GCCGCTCAAT TTCGTCATCC AGACCTCGGA CAGCTACCAG AACCTCAACG CCGTGGTGCG CCGCATGCTT GACGAGATGG CCAAGAACCC GGGCATTGTC TCGCCCGACG TGGACTTGCG GCTGAACAAA CCCGAACTGC GCATCGAGGT GGAACGCGAC CGGGCGGCCG ACCTCGGGGT GAGCGTCGAA GTGGTCGCCA AGGCCATCGA GACGCTGCTC GGCGGGCGCA ACGTGACCCG CTACAAGCGC GATGCCGAAC AGTACGACGT GGTGGTGCAG ACCCAGGCCA GCGGCCGCAG CACGCCCGAG GACATCGAGC GCATTCATGT TCGCGGCCGC AATGAATCCA TGATTCCGCT CTCCAGCCTG GTCAAGGTGA GCGAAAGTGT GTCGCCGCGC GAGCTGAACC ACTTCGGCCA GCGCCGCTCG GTGTCTATCA CGGCCAGCCT GGCGCCCGAC TATTCTCTGG GTGAAGCCTT GGGCTTCATG GACCAGACCG CCGCCAAGGT CTTGAAGACC GGCTACAGCA CCGACCTGAA CGGAACGTCG CGCGAATTCA GGAATTCGCA GGGCGCGCTG GCCATCGTCT TCGTGCTGGC GCTGGTGTTC ATTTTCCTGG TGCTGGCGGC GCAGTTCGAG AGCTTTGTCG ATCCGCTGGT GATCATGCTG TCGGTGCCGC TGTCGATGAT CGGCGCGCTG CTGGCGCTGA AATGGAGCGG CGGCTCGCTC AACGTCTATT CGCAGATCGG CCTGATCACG CTGGTCGGGC TGATCACCAA GCACGGCATC TTGATTGTCG AGTTCACCAA CCAGCTGCGC GGGCAAGGCA TGGAGATGAT CGATGCGCTG GTGAAGGCCT CGTCGCAGCG GCTGCGTCCG ATTTTGATGA CGACCGGCGC GATGGTGCTG GGCGCCTTGC CGCTGGCCCT GGCCCATGGC GCGGGTGCCG AAAGCCGCAT CCAGATCGGC TGGGTGATCG TTGGTGGCAT GTCGCTGGGC ACCTTGCTGA CGGTGTTCGT GGTGCCAACG ATGTACGCCC TGTTTGCCCG CAGCGCCATA CCGGGGGCCA ACACGGCAGC GGTCAAGGAT GAGCCATCAC ATCCGCTGCC TCATGCATCG TCACATCTAC CTGAGCCTGA GTATGTGGGG AAGCCGGGCC GCTGA
|
Protein sequence | MQLAEVSIRR PVFATVLSLL IVLIGAVSFN RLTVREYPKI DEPVVTVSVR YAGASAEVIE SQVTKPLEDS IAGIDGVDVI TSISRADQGQ ISVRFRLEKD ADSAAAEVRD RTSRVRNRLP QAIEEPVIAK VEADAFPVIQ LAFSSESLTP LQINDLVNRI VKPRLQTVTG VADVRIFGER KYAMRVWLDT DKLASYRLTT QDVEDAIRRS NLELPAGRIE SQQREFSVTS QTDLLKPAQF GEIVIKTVNG FSVRVRDVAR VEEGAADERT AVRLNGRPAV GVGVIRQATA NPLDLSAGVR DVIPKLKADL PPDVLIDIAN DNSVFIDRSV KNVYRTIFEA VLLVALVIFV FLRTLRASII PIITIPVSLI GTFALMALAG FTINTLTLLA LVLAIGLVVD DAIVMLENIF RHIEEGMDPF SAGIKGAREI GFAIITMTAT LVAVYAPLAF TPGRTGRLFV EFALALAGAV VVSGFVALTL TPMLCTQLLK HNPKPNRFDR TMERVLTSIS ERYGALLRWI VTARFQPPAQ DRSIGQRIKG FVFQARWIVV AVMLVSGVAI VLVFPTMKQE LSPMEDRGVI LASVNAPDGS TLDYTNRYAQ ALEKMGQPFK EFDRIFANVG NPTVAQASVV YRTVDWEVRS RSTMDMAREL QPQFNALPGV TAFSITPPSL GQGFRERPLN FVIQTSDSYQ NLNAVVRRML DEMAKNPGIV SPDVDLRLNK PELRIEVERD RAADLGVSVE VVAKAIETLL GGRNVTRYKR DAEQYDVVVQ TQASGRSTPE DIERIHVRGR NESMIPLSSL VKVSESVSPR ELNHFGQRRS VSITASLAPD YSLGEALGFM DQTAAKVLKT GYSTDLNGTS REFRNSQGAL AIVFVLALVF IFLVLAAQFE SFVDPLVIML SVPLSMIGAL LALKWSGGSL NVYSQIGLIT LVGLITKHGI LIVEFTNQLR GQGMEMIDAL VKASSQRLRP ILMTTGAMVL GALPLALAHG AGAESRIQIG WVIVGGMSLG TLLTVFVVPT MYALFARSAI PGANTAAVKD EPSHPLPHAS SHLPEPEYVG KPGR
|
| |