Gene Pnap_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1679 
Symbol 
ID4689467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1775529 
End bp1776350 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content62% 
IMG OID639834683 
Productmethyltransferase type 11 
Protein accessionYP_981913 
Protein GI121604584 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.822935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCGG AAATTATAGG TTTGACAGAC TGGCTGAAAA CCCCGCCAGG CGCTTACTTG 
CTGGCTTGGG AGCGCGCCCA TTTCGACGAG GCGGTCAGCG ATATTTTTGG CTACCACGCC
CTGCAGCTGG GGCTGCCCGA ACTCGATGCC CTGCAAGCAA ACCGCATGCC GCACAAATGG
CTGGCCCTTT CATCCATGCC GGGCTTGCCG CTCCAGTCTT CGTTGCAAGG CAACCCGCTC
CATCGGATGG AGCCCGCTGC CATAAGTTCC CCCCAGGTTG CCTTGCTGAC CGATTCGGCG
GCCTTGCCTT TTCCCGAAAA CAGCCTGGAT CTCGTGGTGT TGCCGCACAC GCTGGAGCTT
GGACGCGACC CCCATTCTGC CTTGCGCGAG GTCGCACGCG TTCTGGTTCC CGAGGGACGG
GTGGTGATCA GCGGGTTCAA CCCCGCCAGC CTGTGGGGTT TGCGCCAGCG GCGCGATCAT
TTTTACCAGC GTTTGGGCTA CGACGAGTTT TTTTTGCCCA ATGCCGGTGA CTACATCGGC
TACTGGCGGC TTCGCGACTG GCTGAGGCTG CTCGATTTCG AGGTCGAATC GGCACGTTTT
GGCTGCTACC GCCCGGCGTT TGACAGCCAG AAGTGGCTGG ACCGGTTCGA CTGGATGGAT
GCGGCTGGCG AACGCTGGTG GCCGATCTTC GGGGCCGTCT ATTTTCTGGT GGCGGTCAAG
CATGTGCGGG GCATGCGCCT GCTGGAGCCG GCCTGGAAGG CCCGTAAAGC GCCCGCCGCA
GCACCTGTTG CCGTTGCCAA TAAGAATCCG GCCAGCCGCT GA
 
Protein sequence
MNSEIIGLTD WLKTPPGAYL LAWERAHFDE AVSDIFGYHA LQLGLPELDA LQANRMPHKW 
LALSSMPGLP LQSSLQGNPL HRMEPAAISS PQVALLTDSA ALPFPENSLD LVVLPHTLEL
GRDPHSALRE VARVLVPEGR VVISGFNPAS LWGLRQRRDH FYQRLGYDEF FLPNAGDYIG
YWRLRDWLRL LDFEVESARF GCYRPAFDSQ KWLDRFDWMD AAGERWWPIF GAVYFLVAVK
HVRGMRLLEP AWKARKAPAA APVAVANKNP ASR