| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1677 |
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| Symbol | |
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| ID | 4689570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1773175 |
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| End bp | 1774749 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834681 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_981911 |
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| Protein GI | 121604582 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.728963 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCTTC ACTCCCGATC CGCCCCTCTT TACCCTTCTT TTTCTTTTCC AAACTTCCGG
CTTTTCTCGC TGGTGCTGCT GCTGCTGATG ACCGTGCTGG CAGGCTGTGC CACCCGGCCA
ACGGGCATGC CCGGCGACCC CGTGCTGGCC ACCGGGCCGG GCTCCACCCC CGGGCAACGG
GTTCAGACGG GTCCATTGCG TGCCATTACC CCTGGCCAGG TGAATTCATT CCCGATTGTC
TCGACCGAGC CGCCCAAGGA ACTCTGGGAT CGCATTCGCC GGGGCTTTGC CATGCCCGAC
CTGCAAAACG AACTGGTGAC TGACCGCGAG CAGTGGTACA CCAGCCGTCC GGACTACATC
CTGCGCATGA CCGAGCGTTC CAGCAAATAC CTCTTTCATA TCGTTGAAGA GCTGGAGCGC
CGCCAGATGC CGACCGAGCT GGCCCTGTTG CCCTTCATTG AAAGCGCGTT CAACCCGCAG
GCTGTTTCCA GCGCCAAGGC GGCCGGCATG TGGCAGTTCA TGCCGGCGAC CGGCAAATAC
TTTGACCTGA AGCAAAACGA CTTTCGCGAT GACCGCCGCG ACGTGCTGGC ATCGACCCGC
GCCGCGCTGG ACTACCTGCA AAAACTCTAC GGCATGTTTG GCGACTGGCA CCTGGCACTG
GCCGCCTACA ACTGGGGCGA AGGCAGCGTC AGCCGCGCGA TTGCCAAAAA CCAGAAAGCC
GGCCTGGGCA CCAGTTACAA CGAACTCAAC ATGCCGGCGG AAACCCGGCT TTACGTGCCC
AAGCTGCAGG CGGTGAAAAA TATCGTGGCC AATCCGCAGG CCTTCAACAG CGAGCTGCCG
CTGATTGAAA ACCACCCCTA TTTCCAGCAA GTGCAGATCA CGCGGGATAT TGACGTGGCC
CTGGCCGCGC GGCTGGCCGA CGTGCCGATT GACGTCTTCA AGGCACTCAA CCCTTCGGCC
CGCCGCCCGG TCATCCTGGC CGCAGGTACG CCGCAGATTT TGCTGCCGTG GGACAACGCG
CTGGTGTTCC AGCGCAATTT TGACGCCTAT ACCCAGGGAC AATATGCCAG CTGGACCGCA
TGGACCGCCC CCAGCACCAT GAACGCGGCC GAGGCGGCAA GGCATACCGG CATGAACGAA
GCCGATTTGC GCAGCATGAA CAACATACCG CCGCGCATGC TCATCAAGGC CGGCTCGACC
CTGCTGATAC CGCGCACGGC CCAGATGGAC GATGACGTGA GCAGCCATGT CGCCGACAAT
GCCCAGCTTT CACTGTCGCC TGAAATCACC ACCCGCCGCA CGACCGTCAA GGCACGCAAG
GGCGAGTCCG TCGCCAGCAT TGCCGGCCGC TACGGCCTGA CGGTGGCCAG CGTCGCCAAC
TGGAACAGCG TCAGGGCCGG GGCGGCTTTC AAACAGGGCC ATCAGGTCGT GCTGTATCTG
CCGATCACCG CGCGCAACGT CGCCAACATG GTTGGGTCAT TTAAAAAACC CGCCCCCTTG
TCGGACAACA TCAAAATCAT CCCAGTCAGG CGCAGCGCCA GCAAAACCAT TGTCAAAAAA
TCAAAAAGGC GCTGA
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| Protein sequence | MMLHSRSAPL YPSFSFPNFR LFSLVLLLLM TVLAGCATRP TGMPGDPVLA TGPGSTPGQR
VQTGPLRAIT PGQVNSFPIV STEPPKELWD RIRRGFAMPD LQNELVTDRE QWYTSRPDYI
LRMTERSSKY LFHIVEELER RQMPTELALL PFIESAFNPQ AVSSAKAAGM WQFMPATGKY
FDLKQNDFRD DRRDVLASTR AALDYLQKLY GMFGDWHLAL AAYNWGEGSV SRAIAKNQKA
GLGTSYNELN MPAETRLYVP KLQAVKNIVA NPQAFNSELP LIENHPYFQQ VQITRDIDVA
LAARLADVPI DVFKALNPSA RRPVILAAGT PQILLPWDNA LVFQRNFDAY TQGQYASWTA
WTAPSTMNAA EAARHTGMNE ADLRSMNNIP PRMLIKAGST LLIPRTAQMD DDVSSHVADN
AQLSLSPEIT TRRTTVKARK GESVASIAGR YGLTVASVAN WNSVRAGAAF KQGHQVVLYL
PITARNVANM VGSFKKPAPL SDNIKIIPVR RSASKTIVKK SKRR
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