Gene Pnap_1668 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1668 
Symbol 
ID4689471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1765338 
End bp1765844 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content64% 
IMG OID639834672 
Producthypothetical protein 
Protein accessionYP_981902 
Protein GI121604573 
COG category[S] Function unknown 
COG ID[COG5501] Predicted secreted protein 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.615495 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAAT CCAGCGCTGA GCCTTCAAGC CGAGTCATGC ATAAAAACCG GATGCCATCG 
CGCCGACAGG CACTCAGTCA TACTGCCGCC CTGGCGGCCT TGCTGGCTGG CACCGGCCTG
TTCCCGCAGC TTGCCAGGGC CAGCAGCAAG CAGGCCTTTG ACGCCAGGAC CATTCAGGAC
GCGATGGCGG CGCTGGGTGC CGGCGCCTTG TCCGAAAGCG GCGACGTGAC CTTGAGCGGC
CCGGACATTG CCGAAAACGG CGCTGTCGTT CCGTTTGCCT TCAGCACCAC GCTGCCCGGC
GTCAGGCGCC TGCTGTTGCT GGTGGAAAAA AATCCGGTTC CGCTGGTGGC GCTGTTCAAT
GTGTCGGCCG CTGTCGAGCC GGCTTTTTCC ATCCGCGCCA AGCTGGCGCA GTCATCAAGC
GTGTACGCCG TCGCCGTCAT GGACGATGGC CGGGCGCTGT ACGCCCGCAA GGAAATCAAA
GTCACACTCG GCAGTTGCGG CACCTGA
 
Protein sequence
MQQSSAEPSS RVMHKNRMPS RRQALSHTAA LAALLAGTGL FPQLARASSK QAFDARTIQD 
AMAALGAGAL SESGDVTLSG PDIAENGAVV PFAFSTTLPG VRRLLLLVEK NPVPLVALFN
VSAAVEPAFS IRAKLAQSSS VYAVAVMDDG RALYARKEIK VTLGSCGT