Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1663 |
Symbol | |
ID | 4689952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1758649 |
End bp | 1762254 |
Gene Length | 3606 bp |
Protein Length | 1201 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639834668 |
Product | hypothetical protein |
Protein accession | YP_981898 |
Protein GI | 121604569 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.155855 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.337314 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATCC GCACCCTGTT TTTAAAAGCC TTCGGCCCGT TCACCGACAC CACGCTGGAT TTTTCCGGCC CGGCCGGCCT GCACCTGATT TACGGCGCCA ACGAGGCGGG CAAGTCCTCG GCGCTGCGCG CCATCACCGA TCTGCGCTAT GGCATTCCGA TGCGCAGCAA GGACGATTTT GTCCACGAGT TCAAGAACAT GCGCGTGGCC GGCTGCTTCG AGGATGTGGC GGGCCGCGCC GTCGGACTGG CCCGGCGCAA GGGCATGAAC GACACGCTGA TGGGCGCCGA CCCGCTCACC GGCATGCAGT TGCCGGGCGG CGTGGTCTCG CCCGAGGTGC TGCTGGCGCT GACCGGCGGC GTGGCGCGCG AGCAGTTCGA AACCATGTAC GGGCTCAATT CCCAGCATCT GCGCAAGGGC GGGCAACTCC TGATTCAGGG CGAAGGCGAG CTGGGCGCGG CGCTGTTCGA GGCCAGCACC GGCTCGGCGG GCATCAAGCA GATGCTGCAA ACCCTGCAGG AAGACGCCAA AAAATACTTC AACCCACGCA GCAAGGCGCC GATTCTCAAT GACGCGCTGC GCCAGCTCGA CGAGGCCAAG CAGCGCTACC GGCTGGCAAT CACCAAGCCC GATCAATGGA AAACCTTGAA GCGCGAGCAT GAAGCGGCCG AGCTGCATCT GGCCACTGTC AGACGCGATC TGGCCGGGCA GCGGCGGCGC CAGGCCGAAC TGGCCGAGCT GCGCGCCGTC GAGCCGCTGC TGCAGCAACT GGCGCTCAAC GAGCAGGGCT GGGCGCAAGT CCAGGGCCAT GTGGCGCTGC CCGAAGACGC CAGAGAGTTG CGGCTGGCCG CGCTGCAGCA GCAGGCCCAG GCGCGCCAGG CGCTGCTTGA GGCCCAGGCC GCGCTGGCCG AATGCCGGGC GGGCTTGCAG GCGCTTCGGA TCGAGCCGCT GCTGCTGACG CATGCGCCAG CGATTGACCG GCTGGCCGCT GATCTGGCGC TGGCCCGGCA CGGGCGCGAC GAGCGCCTCA AGCTGCAAGC GCAAGCTGAT TCCGAGGCCG GCCAGCTGTT GCTGCAGGCC GCGCAAATCA TGGGCGGCGG CCAGAGCCCG GACAGCCTGG AGGCGTTTTT CCAGCGTGCC CCTTCAGCGG CGGACCAGGC CGAACTGGCG CGCCTGCTCG ATGAAGCCAA AAGCCTGACG CTGGCGCTGC AGCATGCGCA GGAGCGGCTG GACGCGGCCG AGCGCAAGCT GGCGCTGCAC CGGCGCGAAC TGCTCGAAGC GCCCGCGCTG CCCTTGCAGC AGGCGCTGGC CATGGCGCTG GCGCAGGCGC AACTGCTGGG CGATGCGCCC CAGCGGCTGG CCGAGCAGCA GGCCGCGCTA GGCGCCGAGC AGCGCCGGCT GGCGCAGGCG CTGGCCGATC TGGGGCTGGA CTCCGCGGCG CAACTGACGG CCTCGCGCTG GCTGGCTTCG GCCGAGATTG ACACTTACGA GCAGGTGCGC CGCGACTGGC AGCAGCAGGC GGCACTGAGC CAGAGCGACT TGAAGAAGCT GCAGACGGAC CTGGCCGCGC AGCAGCTGCG CCACAAGAGC CTGTCGGCCA CCGGCGAAGT CGTCACCGCC GAGACCCTGC GCCAGGCCAG AGCCGTGCGC GATGCGGGCT GGCAGACGGT TCGCAGCGCG TTCATCGACC GGCCGGCGGC GGCAGCCGAG CCAGTAACGG AGTCGCCCGG CCATCAGCCG CAATCTCTGG CGGCCGACCT GCCGCACGCC TTCGAGCGCG CGCAGACGCA GGCCGACCGG CAGGCCGACC TGCTGCGCGA AGGCGCGACG CGGGCCGCTG AAGTGGCCGA GTGCGAACAG CGCATCGCCG AAATGACGCA GGCGCAGGCC GAACACCAGC GCGCCCGCGC TGAACAGGCG CAGGCGCTGG CCGTGCTCGA TGAGAACTGG CGCGGCACGC TGGCGCGACT GGGCCTTCCA CACGGAACGG CGGCGCTGGT GCGCGAATGG CAGGCGCTGC GCCAGAGTGC GCTGGAGCGC CACGAGCGCC TCACCGTCGT TGCGCAAGAC CATGCCCGGC TGGCGCAACA AATCAGCGCC GCCACGCAGC CGCTGCTGAC GGCGCTGGGC GCGCTGGGCG CGCTGGGCGC GCTGGGCGCG CTGGGCGCGC TGGGGCTGGC CGCGCCGGAT GAGGCTGCGC CCTTGCAGGT TTTGATGAAG CTGGGCGCCG ACGCCGACCG CCGCCTGCTG GCGCAGCAGG CCGCCATCGC GCAGCGCACC AGCGACATGG CCAGCCTGGC GCAGGACATC GAGGACGCGC AAGCCAGCGT GGCCGAACTG ACGGCGCTGC GCCAGGGTTG CCAGCGCACG CTGGACGACA AGGCACGACT TCTTTACCTG GGCCAGGGCG CCGCCGCCGA GACCCTCAAG GCGCGGCTGG CCGAATTGCA GCACTGGGTG CAGGACTACC AGCGCCATGC CGAGCACCTC GGGCAGGTCA GGGCGATGCA GGACAGCGAA AACGCCGCCC TCGACGCTGC TGGCGCGCTG GGCCAACTGG TGCAGGAGCC GGTGTGGGAA CACCAGTCGG CCTGGCTCGA TGCGCTGGCC TTGCGGCTGG CGCAAACGCG CGAGGCCGTG CAGCTGAAGG CCGCCGGGGA GCGCAGCGAA GCCGAAGAAC TCCGGCGCCA GCAGCGTGCG CAGGCCGATC TGCAAAGCGC CGCGCAGGCG CTTGCGCAAC TGGTGGCGCA GGCCGGCGCA CAAGACGCCG ACGCGCTGCC CGAAGCCGAA ACCCGCTCGG AGCAGCGGCG CACGGCAGCG GCGCGGCTGC ACGATCTGCA GGAGCAACTG GCCCAAACCT CGCCCAAGAA CGCCGCCACG CTGCGCGCCG AACTGGCCGG CCTGGACCGC GTGGCGATTG ACGGCGAAAA GCAGGCCTGC GCGGCAGCTA TTGCGCGGCT GGAGGCCGAT GAGCAAGCCG CCATCGACGC CGAGCAGGCC GCCCGCATCG CGCTGGCGCA GATCGACACC TCGGACGCCG CCGCCCAGGC CAGAGAGGAA ATGGAGGCGG CGATTGCCCG CTACCGCGCT GGCGTGCGGC CGTGGGCGCA GCTCAAGCTG GCGCAGGCCC TGCTCGGCGA AGCCCTGCGG CGTCACCGCG AAAAGGCGCA AGGCCCGGTG GTGGCGCTGG CGGGCGAGTA TTTCCGGCTG ATGACCGGCG GGCGCTTTGT GCGCCTGCGG GTGGACGAGG ACCACGACGC CCCGGTGCTG CTGGCCGAGT CCGCGCAGGG CCAGCGCATG GAAGTCGCCG CCCTGAGCGA AGGCACGGCC GACCAGCTTT ATCTGGCGCT GCGCCTGGCC GCGCTGGAGG TGCAGCGCAA ACCCGACCGC ATGATGCCGC TGGTGCTGGA CGACGTGCTT ATGACCGCCG ATGACGAACG CGCCGCCAGC ATGTTCAGCG CGCTGGCAAA ATTCGCCACT GCGGGCCAGG TGCTGGTGTT CACGCACCAC CATCATTTGC TGCAGGTGGC GTGCGGCGCG CTGGGGCATG ACGGGCTGCG GGTTCACCGG CTTGAGGCCG CCTTCGAGCG CCATCCCGCG CCATGA
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Protein sequence | MKIRTLFLKA FGPFTDTTLD FSGPAGLHLI YGANEAGKSS ALRAITDLRY GIPMRSKDDF VHEFKNMRVA GCFEDVAGRA VGLARRKGMN DTLMGADPLT GMQLPGGVVS PEVLLALTGG VAREQFETMY GLNSQHLRKG GQLLIQGEGE LGAALFEAST GSAGIKQMLQ TLQEDAKKYF NPRSKAPILN DALRQLDEAK QRYRLAITKP DQWKTLKREH EAAELHLATV RRDLAGQRRR QAELAELRAV EPLLQQLALN EQGWAQVQGH VALPEDAREL RLAALQQQAQ ARQALLEAQA ALAECRAGLQ ALRIEPLLLT HAPAIDRLAA DLALARHGRD ERLKLQAQAD SEAGQLLLQA AQIMGGGQSP DSLEAFFQRA PSAADQAELA RLLDEAKSLT LALQHAQERL DAAERKLALH RRELLEAPAL PLQQALAMAL AQAQLLGDAP QRLAEQQAAL GAEQRRLAQA LADLGLDSAA QLTASRWLAS AEIDTYEQVR RDWQQQAALS QSDLKKLQTD LAAQQLRHKS LSATGEVVTA ETLRQARAVR DAGWQTVRSA FIDRPAAAAE PVTESPGHQP QSLAADLPHA FERAQTQADR QADLLREGAT RAAEVAECEQ RIAEMTQAQA EHQRARAEQA QALAVLDENW RGTLARLGLP HGTAALVREW QALRQSALER HERLTVVAQD HARLAQQISA ATQPLLTALG ALGALGALGA LGALGLAAPD EAAPLQVLMK LGADADRRLL AQQAAIAQRT SDMASLAQDI EDAQASVAEL TALRQGCQRT LDDKARLLYL GQGAAAETLK ARLAELQHWV QDYQRHAEHL GQVRAMQDSE NAALDAAGAL GQLVQEPVWE HQSAWLDALA LRLAQTREAV QLKAAGERSE AEELRRQQRA QADLQSAAQA LAQLVAQAGA QDADALPEAE TRSEQRRTAA ARLHDLQEQL AQTSPKNAAT LRAELAGLDR VAIDGEKQAC AAAIARLEAD EQAAIDAEQA ARIALAQIDT SDAAAQAREE MEAAIARYRA GVRPWAQLKL AQALLGEALR RHREKAQGPV VALAGEYFRL MTGGRFVRLR VDEDHDAPVL LAESAQGQRM EVAALSEGTA DQLYLALRLA ALEVQRKPDR MMPLVLDDVL MTADDERAAS MFSALAKFAT AGQVLVFTHH HHLLQVACGA LGHDGLRVHR LEAAFERHPA P
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