Gene Pnap_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1663 
Symbol 
ID4689952 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1758649 
End bp1762254 
Gene Length3606 bp 
Protein Length1201 aa 
Translation table11 
GC content71% 
IMG OID639834668 
Producthypothetical protein 
Protein accessionYP_981898 
Protein GI121604569 
COG category[S] Function unknown 
COG ID[COG4717] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.155855 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.337314 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC GCACCCTGTT TTTAAAAGCC TTCGGCCCGT TCACCGACAC CACGCTGGAT 
TTTTCCGGCC CGGCCGGCCT GCACCTGATT TACGGCGCCA ACGAGGCGGG CAAGTCCTCG
GCGCTGCGCG CCATCACCGA TCTGCGCTAT GGCATTCCGA TGCGCAGCAA GGACGATTTT
GTCCACGAGT TCAAGAACAT GCGCGTGGCC GGCTGCTTCG AGGATGTGGC GGGCCGCGCC
GTCGGACTGG CCCGGCGCAA GGGCATGAAC GACACGCTGA TGGGCGCCGA CCCGCTCACC
GGCATGCAGT TGCCGGGCGG CGTGGTCTCG CCCGAGGTGC TGCTGGCGCT GACCGGCGGC
GTGGCGCGCG AGCAGTTCGA AACCATGTAC GGGCTCAATT CCCAGCATCT GCGCAAGGGC
GGGCAACTCC TGATTCAGGG CGAAGGCGAG CTGGGCGCGG CGCTGTTCGA GGCCAGCACC
GGCTCGGCGG GCATCAAGCA GATGCTGCAA ACCCTGCAGG AAGACGCCAA AAAATACTTC
AACCCACGCA GCAAGGCGCC GATTCTCAAT GACGCGCTGC GCCAGCTCGA CGAGGCCAAG
CAGCGCTACC GGCTGGCAAT CACCAAGCCC GATCAATGGA AAACCTTGAA GCGCGAGCAT
GAAGCGGCCG AGCTGCATCT GGCCACTGTC AGACGCGATC TGGCCGGGCA GCGGCGGCGC
CAGGCCGAAC TGGCCGAGCT GCGCGCCGTC GAGCCGCTGC TGCAGCAACT GGCGCTCAAC
GAGCAGGGCT GGGCGCAAGT CCAGGGCCAT GTGGCGCTGC CCGAAGACGC CAGAGAGTTG
CGGCTGGCCG CGCTGCAGCA GCAGGCCCAG GCGCGCCAGG CGCTGCTTGA GGCCCAGGCC
GCGCTGGCCG AATGCCGGGC GGGCTTGCAG GCGCTTCGGA TCGAGCCGCT GCTGCTGACG
CATGCGCCAG CGATTGACCG GCTGGCCGCT GATCTGGCGC TGGCCCGGCA CGGGCGCGAC
GAGCGCCTCA AGCTGCAAGC GCAAGCTGAT TCCGAGGCCG GCCAGCTGTT GCTGCAGGCC
GCGCAAATCA TGGGCGGCGG CCAGAGCCCG GACAGCCTGG AGGCGTTTTT CCAGCGTGCC
CCTTCAGCGG CGGACCAGGC CGAACTGGCG CGCCTGCTCG ATGAAGCCAA AAGCCTGACG
CTGGCGCTGC AGCATGCGCA GGAGCGGCTG GACGCGGCCG AGCGCAAGCT GGCGCTGCAC
CGGCGCGAAC TGCTCGAAGC GCCCGCGCTG CCCTTGCAGC AGGCGCTGGC CATGGCGCTG
GCGCAGGCGC AACTGCTGGG CGATGCGCCC CAGCGGCTGG CCGAGCAGCA GGCCGCGCTA
GGCGCCGAGC AGCGCCGGCT GGCGCAGGCG CTGGCCGATC TGGGGCTGGA CTCCGCGGCG
CAACTGACGG CCTCGCGCTG GCTGGCTTCG GCCGAGATTG ACACTTACGA GCAGGTGCGC
CGCGACTGGC AGCAGCAGGC GGCACTGAGC CAGAGCGACT TGAAGAAGCT GCAGACGGAC
CTGGCCGCGC AGCAGCTGCG CCACAAGAGC CTGTCGGCCA CCGGCGAAGT CGTCACCGCC
GAGACCCTGC GCCAGGCCAG AGCCGTGCGC GATGCGGGCT GGCAGACGGT TCGCAGCGCG
TTCATCGACC GGCCGGCGGC GGCAGCCGAG CCAGTAACGG AGTCGCCCGG CCATCAGCCG
CAATCTCTGG CGGCCGACCT GCCGCACGCC TTCGAGCGCG CGCAGACGCA GGCCGACCGG
CAGGCCGACC TGCTGCGCGA AGGCGCGACG CGGGCCGCTG AAGTGGCCGA GTGCGAACAG
CGCATCGCCG AAATGACGCA GGCGCAGGCC GAACACCAGC GCGCCCGCGC TGAACAGGCG
CAGGCGCTGG CCGTGCTCGA TGAGAACTGG CGCGGCACGC TGGCGCGACT GGGCCTTCCA
CACGGAACGG CGGCGCTGGT GCGCGAATGG CAGGCGCTGC GCCAGAGTGC GCTGGAGCGC
CACGAGCGCC TCACCGTCGT TGCGCAAGAC CATGCCCGGC TGGCGCAACA AATCAGCGCC
GCCACGCAGC CGCTGCTGAC GGCGCTGGGC GCGCTGGGCG CGCTGGGCGC GCTGGGCGCG
CTGGGCGCGC TGGGGCTGGC CGCGCCGGAT GAGGCTGCGC CCTTGCAGGT TTTGATGAAG
CTGGGCGCCG ACGCCGACCG CCGCCTGCTG GCGCAGCAGG CCGCCATCGC GCAGCGCACC
AGCGACATGG CCAGCCTGGC GCAGGACATC GAGGACGCGC AAGCCAGCGT GGCCGAACTG
ACGGCGCTGC GCCAGGGTTG CCAGCGCACG CTGGACGACA AGGCACGACT TCTTTACCTG
GGCCAGGGCG CCGCCGCCGA GACCCTCAAG GCGCGGCTGG CCGAATTGCA GCACTGGGTG
CAGGACTACC AGCGCCATGC CGAGCACCTC GGGCAGGTCA GGGCGATGCA GGACAGCGAA
AACGCCGCCC TCGACGCTGC TGGCGCGCTG GGCCAACTGG TGCAGGAGCC GGTGTGGGAA
CACCAGTCGG CCTGGCTCGA TGCGCTGGCC TTGCGGCTGG CGCAAACGCG CGAGGCCGTG
CAGCTGAAGG CCGCCGGGGA GCGCAGCGAA GCCGAAGAAC TCCGGCGCCA GCAGCGTGCG
CAGGCCGATC TGCAAAGCGC CGCGCAGGCG CTTGCGCAAC TGGTGGCGCA GGCCGGCGCA
CAAGACGCCG ACGCGCTGCC CGAAGCCGAA ACCCGCTCGG AGCAGCGGCG CACGGCAGCG
GCGCGGCTGC ACGATCTGCA GGAGCAACTG GCCCAAACCT CGCCCAAGAA CGCCGCCACG
CTGCGCGCCG AACTGGCCGG CCTGGACCGC GTGGCGATTG ACGGCGAAAA GCAGGCCTGC
GCGGCAGCTA TTGCGCGGCT GGAGGCCGAT GAGCAAGCCG CCATCGACGC CGAGCAGGCC
GCCCGCATCG CGCTGGCGCA GATCGACACC TCGGACGCCG CCGCCCAGGC CAGAGAGGAA
ATGGAGGCGG CGATTGCCCG CTACCGCGCT GGCGTGCGGC CGTGGGCGCA GCTCAAGCTG
GCGCAGGCCC TGCTCGGCGA AGCCCTGCGG CGTCACCGCG AAAAGGCGCA AGGCCCGGTG
GTGGCGCTGG CGGGCGAGTA TTTCCGGCTG ATGACCGGCG GGCGCTTTGT GCGCCTGCGG
GTGGACGAGG ACCACGACGC CCCGGTGCTG CTGGCCGAGT CCGCGCAGGG CCAGCGCATG
GAAGTCGCCG CCCTGAGCGA AGGCACGGCC GACCAGCTTT ATCTGGCGCT GCGCCTGGCC
GCGCTGGAGG TGCAGCGCAA ACCCGACCGC ATGATGCCGC TGGTGCTGGA CGACGTGCTT
ATGACCGCCG ATGACGAACG CGCCGCCAGC ATGTTCAGCG CGCTGGCAAA ATTCGCCACT
GCGGGCCAGG TGCTGGTGTT CACGCACCAC CATCATTTGC TGCAGGTGGC GTGCGGCGCG
CTGGGGCATG ACGGGCTGCG GGTTCACCGG CTTGAGGCCG CCTTCGAGCG CCATCCCGCG
CCATGA
 
Protein sequence
MKIRTLFLKA FGPFTDTTLD FSGPAGLHLI YGANEAGKSS ALRAITDLRY GIPMRSKDDF 
VHEFKNMRVA GCFEDVAGRA VGLARRKGMN DTLMGADPLT GMQLPGGVVS PEVLLALTGG
VAREQFETMY GLNSQHLRKG GQLLIQGEGE LGAALFEAST GSAGIKQMLQ TLQEDAKKYF
NPRSKAPILN DALRQLDEAK QRYRLAITKP DQWKTLKREH EAAELHLATV RRDLAGQRRR
QAELAELRAV EPLLQQLALN EQGWAQVQGH VALPEDAREL RLAALQQQAQ ARQALLEAQA
ALAECRAGLQ ALRIEPLLLT HAPAIDRLAA DLALARHGRD ERLKLQAQAD SEAGQLLLQA
AQIMGGGQSP DSLEAFFQRA PSAADQAELA RLLDEAKSLT LALQHAQERL DAAERKLALH
RRELLEAPAL PLQQALAMAL AQAQLLGDAP QRLAEQQAAL GAEQRRLAQA LADLGLDSAA
QLTASRWLAS AEIDTYEQVR RDWQQQAALS QSDLKKLQTD LAAQQLRHKS LSATGEVVTA
ETLRQARAVR DAGWQTVRSA FIDRPAAAAE PVTESPGHQP QSLAADLPHA FERAQTQADR
QADLLREGAT RAAEVAECEQ RIAEMTQAQA EHQRARAEQA QALAVLDENW RGTLARLGLP
HGTAALVREW QALRQSALER HERLTVVAQD HARLAQQISA ATQPLLTALG ALGALGALGA
LGALGLAAPD EAAPLQVLMK LGADADRRLL AQQAAIAQRT SDMASLAQDI EDAQASVAEL
TALRQGCQRT LDDKARLLYL GQGAAAETLK ARLAELQHWV QDYQRHAEHL GQVRAMQDSE
NAALDAAGAL GQLVQEPVWE HQSAWLDALA LRLAQTREAV QLKAAGERSE AEELRRQQRA
QADLQSAAQA LAQLVAQAGA QDADALPEAE TRSEQRRTAA ARLHDLQEQL AQTSPKNAAT
LRAELAGLDR VAIDGEKQAC AAAIARLEAD EQAAIDAEQA ARIALAQIDT SDAAAQAREE
MEAAIARYRA GVRPWAQLKL AQALLGEALR RHREKAQGPV VALAGEYFRL MTGGRFVRLR
VDEDHDAPVL LAESAQGQRM EVAALSEGTA DQLYLALRLA ALEVQRKPDR MMPLVLDDVL
MTADDERAAS MFSALAKFAT AGQVLVFTHH HHLLQVACGA LGHDGLRVHR LEAAFERHPA
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