Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1660 |
Symbol | |
ID | 4690086 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1754898 |
End bp | 1756430 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639834665 |
Product | major facilitator superfamily transporter |
Protein accession | YP_981895 |
Protein GI | 121604566 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.46395 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.926796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGGTA AGGGACTACG CTTGCATGAC CGCTCCATTT TCGGAGTCGC CAGAAAGCAA TTCATGCTGA AGTCAATCAT TGAAAAACAA GATGCGGCAG TCGTCGCAAG CGTGGAACGC ACGCCTTCGG TCCGGTGGGT GCTCGCCAGC CTGTCGCTGT CCATGCTGCT GTCCTCGCTC GGCACCAGCA TCGCCAATGT CGGCCTGCCG ACCTTGGCGC AAGCGTTCAA CGCCTCCTTC CAGCAAGTGC AATGGGTCGT CCTCGCGTAT CTGCTCGCCA TCACCACCCT GATCGTCAGC GTCGGGCGGC TCGGCGACAT CACCGGCCGA AGGCGGTTGC TGCTGGCCGG AATCTTCCTG TTCACGGTGG CTTCGATCCT GTGCGGCATC GCGCCCACGC TATGGTTCTT GATTGCCGCC CGGGCGGCGC AGGGCCTGGG CGCCGCCATC ATGATGGCCC TGACCATGGC TTTTGTCGGT GAGACGGTTA CGAAGGCCAA GCTAGGCGGC GCCATGGGGC TGCTGGCAAC GATGTCCGCA GTGGGCACCG CGCTCGGTCC ATCGCTCGGC GGCATTCTGA TTGCCGGGTT CGGCTGGCGG ACCATCTTCC TCGTCAACGT CCCGCTGGGC ATCGCGGCGT TTCTGCTCGC GCATCGCACC CTGCCGGTTG ATCGCCGGGG GCCAAGGACG AATAGTGCCG GCTTCGACCC CGTGGGCACG CTGCTGCTGG CGCTGACGCT CGCGGCGTAT GCACTCGCCA TGACGATGGG GCGCGGCAGT TTCGGTGTGC TCAACATGGC GCTGCTGCTG GCGGCTGCCC TGGGCGTTGG CCTGTTCGTG CGCGCCGAGG CGAAAGCCGC CTCGCCTTTG ATCAGACTGG CGATGTTCCG TGATCGAAGC TTGAGTGCGA GCCTGGCCAT GAGCGCGCTC GTCTCGACGG TGATGATGGC GACGCTGGTG GTCGGGCCGT TCTATCTGTC GCGCGCGCTC GGGCTCGACG CGGCGCTGGT CGGGCTCGTG CTGTCGGCCG GCCCGTTTGC CGCCGCGCTG GCCGGCGTGC CGGCTGGCCG CATGGCGGAC CGTTTTGGCG CGCAGCGCAT GACCATCGTC GGACTCATCG GCATGGCGGC CGGCTGCTTC ATTCTGTCCA TGCTGCCGGC GCCGCCCGGC ATCCTTGGCA TCGCTGGCTA TATCGCCCCC ATCGTCGTCG TCACCGTCGG CTATGCGCTG TTCATGACGG CCAACAACAC CGCCGTCATG GCGGATATCC GTGCGGATCA GCGCGGCGTC ATTTCCGGCA TGCTCAGCCT GTCGCGCAAT CTCGGGCTCA TCACCGGCGC ATCCGTCATG GGCGCTGTGT TCGCGCTCGC ATCAAGGGCG GCCGACATCA GCACGGCGCG TCCCGAGGCG GTGGCCACGG GCATGCGGAT CACGTTTGCC GTCGCGGCGA TGCTGATCGT CGTCGCGCTC GCCATCGCGG TGGCAAGCCG TGCGCGCGCA AGCCGCCATT CGCTTTCTGC GGACGTGTCA TGA
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Protein sequence | MPGKGLRLHD RSIFGVARKQ FMLKSIIEKQ DAAVVASVER TPSVRWVLAS LSLSMLLSSL GTSIANVGLP TLAQAFNASF QQVQWVVLAY LLAITTLIVS VGRLGDITGR RRLLLAGIFL FTVASILCGI APTLWFLIAA RAAQGLGAAI MMALTMAFVG ETVTKAKLGG AMGLLATMSA VGTALGPSLG GILIAGFGWR TIFLVNVPLG IAAFLLAHRT LPVDRRGPRT NSAGFDPVGT LLLALTLAAY ALAMTMGRGS FGVLNMALLL AAALGVGLFV RAEAKAASPL IRLAMFRDRS LSASLAMSAL VSTVMMATLV VGPFYLSRAL GLDAALVGLV LSAGPFAAAL AGVPAGRMAD RFGAQRMTIV GLIGMAAGCF ILSMLPAPPG ILGIAGYIAP IVVVTVGYAL FMTANNTAVM ADIRADQRGV ISGMLSLSRN LGLITGASVM GAVFALASRA ADISTARPEA VATGMRITFA VAAMLIVVAL AIAVASRARA SRHSLSADVS
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