| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1660 |
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| Symbol | |
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| ID | 4690086 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1754898 |
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| End bp | 1756430 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834665 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_981895 |
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| Protein GI | 121604566 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.46395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.926796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGGTA AGGGACTACG CTTGCATGAC CGCTCCATTT TCGGAGTCGC CAGAAAGCAA
TTCATGCTGA AGTCAATCAT TGAAAAACAA GATGCGGCAG TCGTCGCAAG CGTGGAACGC
ACGCCTTCGG TCCGGTGGGT GCTCGCCAGC CTGTCGCTGT CCATGCTGCT GTCCTCGCTC
GGCACCAGCA TCGCCAATGT CGGCCTGCCG ACCTTGGCGC AAGCGTTCAA CGCCTCCTTC
CAGCAAGTGC AATGGGTCGT CCTCGCGTAT CTGCTCGCCA TCACCACCCT GATCGTCAGC
GTCGGGCGGC TCGGCGACAT CACCGGCCGA AGGCGGTTGC TGCTGGCCGG AATCTTCCTG
TTCACGGTGG CTTCGATCCT GTGCGGCATC GCGCCCACGC TATGGTTCTT GATTGCCGCC
CGGGCGGCGC AGGGCCTGGG CGCCGCCATC ATGATGGCCC TGACCATGGC TTTTGTCGGT
GAGACGGTTA CGAAGGCCAA GCTAGGCGGC GCCATGGGGC TGCTGGCAAC GATGTCCGCA
GTGGGCACCG CGCTCGGTCC ATCGCTCGGC GGCATTCTGA TTGCCGGGTT CGGCTGGCGG
ACCATCTTCC TCGTCAACGT CCCGCTGGGC ATCGCGGCGT TTCTGCTCGC GCATCGCACC
CTGCCGGTTG ATCGCCGGGG GCCAAGGACG AATAGTGCCG GCTTCGACCC CGTGGGCACG
CTGCTGCTGG CGCTGACGCT CGCGGCGTAT GCACTCGCCA TGACGATGGG GCGCGGCAGT
TTCGGTGTGC TCAACATGGC GCTGCTGCTG GCGGCTGCCC TGGGCGTTGG CCTGTTCGTG
CGCGCCGAGG CGAAAGCCGC CTCGCCTTTG ATCAGACTGG CGATGTTCCG TGATCGAAGC
TTGAGTGCGA GCCTGGCCAT GAGCGCGCTC GTCTCGACGG TGATGATGGC GACGCTGGTG
GTCGGGCCGT TCTATCTGTC GCGCGCGCTC GGGCTCGACG CGGCGCTGGT CGGGCTCGTG
CTGTCGGCCG GCCCGTTTGC CGCCGCGCTG GCCGGCGTGC CGGCTGGCCG CATGGCGGAC
CGTTTTGGCG CGCAGCGCAT GACCATCGTC GGACTCATCG GCATGGCGGC CGGCTGCTTC
ATTCTGTCCA TGCTGCCGGC GCCGCCCGGC ATCCTTGGCA TCGCTGGCTA TATCGCCCCC
ATCGTCGTCG TCACCGTCGG CTATGCGCTG TTCATGACGG CCAACAACAC CGCCGTCATG
GCGGATATCC GTGCGGATCA GCGCGGCGTC ATTTCCGGCA TGCTCAGCCT GTCGCGCAAT
CTCGGGCTCA TCACCGGCGC ATCCGTCATG GGCGCTGTGT TCGCGCTCGC ATCAAGGGCG
GCCGACATCA GCACGGCGCG TCCCGAGGCG GTGGCCACGG GCATGCGGAT CACGTTTGCC
GTCGCGGCGA TGCTGATCGT CGTCGCGCTC GCCATCGCGG TGGCAAGCCG TGCGCGCGCA
AGCCGCCATT CGCTTTCTGC GGACGTGTCA TGA
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| Protein sequence | MPGKGLRLHD RSIFGVARKQ FMLKSIIEKQ DAAVVASVER TPSVRWVLAS LSLSMLLSSL
GTSIANVGLP TLAQAFNASF QQVQWVVLAY LLAITTLIVS VGRLGDITGR RRLLLAGIFL
FTVASILCGI APTLWFLIAA RAAQGLGAAI MMALTMAFVG ETVTKAKLGG AMGLLATMSA
VGTALGPSLG GILIAGFGWR TIFLVNVPLG IAAFLLAHRT LPVDRRGPRT NSAGFDPVGT
LLLALTLAAY ALAMTMGRGS FGVLNMALLL AAALGVGLFV RAEAKAASPL IRLAMFRDRS
LSASLAMSAL VSTVMMATLV VGPFYLSRAL GLDAALVGLV LSAGPFAAAL AGVPAGRMAD
RFGAQRMTIV GLIGMAAGCF ILSMLPAPPG ILGIAGYIAP IVVVTVGYAL FMTANNTAVM
ADIRADQRGV ISGMLSLSRN LGLITGASVM GAVFALASRA ADISTARPEA VATGMRITFA
VAAMLIVVAL AIAVASRARA SRHSLSADVS
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