Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1651 |
Symbol | |
ID | 4689163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1746260 |
End bp | 1747135 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639834656 |
Product | inner-membrane translocator |
Protein accession | YP_981886 |
Protein GI | 121604557 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGACT TCCTCCAACT CCTTTTCTCA GGCCTGGCCA CCGGCGCGAT CTACGCGCTG GCGGCTTTGG GCTTTACCCT GCTGTGGCAG GCTTCGGGCA CGATCAATTT TGCCCAGGGC GAATTCGTCA TGCTGCCGGC CTTCATGATG CTCGGCTTCA TGTCGCTGGG CGCGCCCATG CTGGTGAGCT TTGTCCTTAC CGTGCTGCTG GCCATTTTGG TGCTGGGCTG GGTGTTCAAG CGCGGCGTGG TCGATCCGCT GTTCAAGTAC GGCATGATGC CCATCGTCGT GGCCACCATC GGCCTGTCGA TCTTCATGCG CAACGGCGTG CGCGCCGGCT ACAGCGCCGA AGCCCATCCG TTTCCCAGCC TGTTTGCCGA CAAGCTGTTC AACATTGCCG GCGTCACGGT GACGCTGCAG GACATCGGCA CCTTTGTGCT GGCGATGGCC ATCGTGATGG GAACGCAGGC CTTTCTGGCG AAGACCGTCA CCGGCCGCGC CATGCAGGCG GTCGCCCAGA ACACCGAAAG CGCCTCGGTG CTCGGCATCA ATGTGCCGCG CATGATTTTC TACACTTTCG CCATCAATGC GGTGCTGGCG GTGGCGGCGG CGCTGCTGGT CACGCCGACC TACCTGGCCA AGTTCGACAT GGGCGAGGGC CTGGGCAACA AGGCCTTTTT TGCGGCCATC ATCGGCGGCT TCAACAACTC GCGCGGCGCG CTGGTGGGCG GCCTGCTCGT CGGGGTGTGT GAAAACCTGG CTGCGGCTTA TATTTCGCCC GCCTACAAGG ATGCGGTGGC CCTGGTGATT TTTATGGTCG TGATCCTGTT CAAGCCGCAA GGTCTGCTGG GCAAGAAAGA GGAGCGAAAA GTATGA
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Protein sequence | MTDFLQLLFS GLATGAIYAL AALGFTLLWQ ASGTINFAQG EFVMLPAFMM LGFMSLGAPM LVSFVLTVLL AILVLGWVFK RGVVDPLFKY GMMPIVVATI GLSIFMRNGV RAGYSAEAHP FPSLFADKLF NIAGVTVTLQ DIGTFVLAMA IVMGTQAFLA KTVTGRAMQA VAQNTESASV LGINVPRMIF YTFAINAVLA VAAALLVTPT YLAKFDMGEG LGNKAFFAAI IGGFNNSRGA LVGGLLVGVC ENLAAAYISP AYKDAVALVI FMVVILFKPQ GLLGKKEERK V
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