| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1645 |
|---|
| Symbol | |
|---|
| ID | 4689353 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1737723 |
|---|
| End bp | 1738874 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639834650 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_981880 |
|---|
| Protein GI | 121604551 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.56459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCTTGTTT TTGCCGTGAT GGCCTACCTC AAGCCTGGTT TGCTGGGTGA ATTTCCAAAA
GCGCAAGCCA TTGGCCTGTT GCTCGTCGGG ATGGGCGCAG GCCAGGCGCG CGACATCTGG
AATGCCCGGG TCCGAAAACT TGACTATTTG TGCCACTACC ATCAGACCCG CCTGGAGCAG
TTCACCAGCG CTTACCAGCT CCTGCAGGTA TCGCATTCAC AGCTTGAGCG CAGGATGGCC
GGCGGCACGA ACAATCTGCG CGCAGCACTG GACCGGCTTG AACTGCGCGA CCCGGTCTTC
GACGTGACGC GTGATGAGCC GCTCGGCGGA ATCGGCGAGT GGCTTCTGGA GATCATGGTG
GAGGCCGGCA ACCTGCATAT CGCGGCCCTG TATGAAATGA ACGGCAAAGG CATCCTGCGC
CTGCCATCTG TCGCCATGGT CGGCAAAGCC ACGGACCTCT CGCTGTTCAA CCCTTTGCTG
CGGGAAACGC TGCGTACCGG CTCGCTGACC AGCGTGCATG CGAACAATGA AGCGGTGCAC
GAGCATGTCA TCGCTGTCGT GCCCCTGATC GATGCTGCCG GCCATATTCA TGGCGTCGTC
GCCATCTACG ACATGCCCTT CCTGAGCATC CATCAGGACA CTTTTGAATT GCTGGGTGTG
CTGGGCAGGC ATATCGGGGA CATTTTGTCG CGCCGGACCC GGCCCATGGG CGAGACGCAA
AGTCCGTTCG CCTTGCGCGA GTGCCTGCAG CGCAATCTTG AGGATGCCAA ACGACATGCC
TTGCCGGCGG CATTGATCGC CTGCAAGATT GTCGATGCCG AGCATCGCGA CAGCCTGGTG
AACCACTGCT GCAACAGCAG CCGTGGATTG GACCAAAGCT GGATTTCAAT CAACCGGCAA
GGCCAGTCGG TGATTGTGAA GCTCTTGCCA CTGACCGATG AGGCCGGCGT CAAGAGTTAT
CTGGCGCGGC TGGAGCGCGA GCAAACTGGC AGTGACGCGG CAATGCACGG ACTCGTCACG
TATCAATGGA TGCTGGACAA GAACCGTACC GCCGATGAAA TGCTGGCGGA GGTCTGCGCC
GCATGCGACA TGGATGCCCC TGAATCCGTG CCGGAAAAGC CTCTGCACTT TCTCTCGGAG
GCAGCCCTGT GA
|
|---|
| Protein sequence | MLVFAVMAYL KPGLLGEFPK AQAIGLLLVG MGAGQARDIW NARVRKLDYL CHYHQTRLEQ
FTSAYQLLQV SHSQLERRMA GGTNNLRAAL DRLELRDPVF DVTRDEPLGG IGEWLLEIMV
EAGNLHIAAL YEMNGKGILR LPSVAMVGKA TDLSLFNPLL RETLRTGSLT SVHANNEAVH
EHVIAVVPLI DAAGHIHGVV AIYDMPFLSI HQDTFELLGV LGRHIGDILS RRTRPMGETQ
SPFALRECLQ RNLEDAKRHA LPAALIACKI VDAEHRDSLV NHCCNSSRGL DQSWISINRQ
GQSVIVKLLP LTDEAGVKSY LARLEREQTG SDAAMHGLVT YQWMLDKNRT ADEMLAEVCA
ACDMDAPESV PEKPLHFLSE AAL
|
|---|
| |