Gene Pnap_1640 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1640 
Symbol 
ID4688876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1731415 
End bp1733403 
Gene Length1989 bp 
Protein Length662 aa 
Translation table11 
GC content50% 
IMG OID639834645 
Producthypothetical protein 
Protein accessionYP_981875 
Protein GI121604546 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.157145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAC AACAGTTTTA CTTGTATCGT GCCCTGGTCA CAAGCGGCAT CAAACCGCTG 
CTTGTGCCGA ACGGCTTAGT CCGTGAGGGG CCAGAAAAGC AATTGCAGCG GCAGTTTTTG
TATTGGGGGT CACACACCCT GCAACGCATC CTCGCGGTAA TTTTATTTAC CGTTTTCTGG
CTTGCACCAG CCGCCGCCGA AACACCCAGG TCAATTAACA TGAAGTTGCT GGTTGTATCG
GCGGATGGCA ACGAGCCGGT ATTTGCTGGC ATCAAGTCGA TTTTGAATCA GATCGGCATC
CCCTACGATA CTTTGGTCGC CAGCAAAACA CCACTGACTG CGCAAACCTT GTCTGACGGA
CTGGGGGCAG GACGTTATCA GGGTGTCCTT CTCACTACCG GGAATCTCGC CTATGAAGCG
TCCCCGAACA ATTGGCAAAG CGCATTTACC CAAGCCCAAT GGCAAATGCT TTGGCAATAT
GAAGCTGACT TTCGGGTCAG GCAGGCAACC CTGTATACCT ATCCGGCAGG CGCACCCGAC
AACTATGGAC TGACGCCAAT CAGCGCCGCC GATACCAGTT ACACACCACT CAAGGCCAGT
CTGACGACAG CCGGACAGCA ACTGTTCGGT TATTTGAACC CAGCCAGTCC TGTTTCCATT
ACGGGTGCCT GGACTTATCT GGTCAAACCG ATTTCGAGTG GCAACCCGGT TTCTTTGTTA
AACACTGCGG ACGGCTATTC CCTCGCATCC ATTTATACCT ACCCCGATGG CCGACAGAAT
CTGGCTATCA CAACCGATGG AAACCCGGAA CTGACCCACA CTCTTTTGCT GGGCTATGGC
GTAGTCAACT GGGTAAGCAA GGGTTTCTTT CTGGGAGAGC GCAAGGTTTA TCTAAACGCA
CAACCTGATG ACATCATGAT TCCAGATGAT ATTTGGGATC CAGTGCGTTT GTCTGACCAG
ACCGGGATTG AATACCGGAT AACGGGCAAT GATTACAACC GGCTCATCAC CTGGCAAAAT
GCAATGCGCG CATCGAACAC GAATGCAGCG CAAATAGAGC TGGAAATGCC ATACAACGGT
GTTGGGGTGT CAGGGATTTA TCCCAACGAT ACATTGACAG CTGCCATACG AAGCAAACCC
AATCAATTCA AATGGATCAG CCACACTTAT GAGCACGAAT TACTGACCGA CATCAGCTAC
ACCAATGCGC TGGCGCAACT CAGCAAAAAT CATACGGTGG CGCAACAGCT GGGTTTCAGC
AAGTATCAAA AAGACAGCAT GATTCAACCC GAAATTTCAG GGCTGAATAA TCCCGAGTTT
CTCAGGGCTG CCAAGGATTT CGGCATACGC TATATTTTGT CTGATACTTC ACAGCCCGGC
TGGAAAAATC CCAGCCCCAA CACTGGTTTC TACAGCCTCC ATCAGCCCAG CATCCTGATC
ATTCCGCGCT ACCCAACCAA TTTGTACTAC AACGTCTCAA CACCTACCGA GTGGCTGTCC
GAGTACAACT ATTTTTATGC TCCAGGCGGT CTTTTTCCTA CTTGGGACCA CAAGCTGACC
TACAGTGAAC TGCTGAATAA GGAGTCTGAA ATATGGCTCA GGTATTTGTT GAAATTCGAT
CTGAATTCCG TGATGTTTCA CCAGAGCAAT CTGCGTGCCT ATGACAACAA GAATTCACTG
CTGGGCGATC TGATCAATGC CACTTTGGCG AAATACAACA GCATGTACAA ACTGCCGATA
CGCAGTCCAA GCCAGCATGA CACCGGACTT TTGATGGCCG CCAGAATGAC GTATAACGAC
TCCGGCGTCA GTGGCCGTAT TGTGCTGGGG ACAACCAATA GTATTGCATT GAAAACGGTT
AAACCGGTCA AAGCTCCCCT GACCGGGATT AACTACGGCA CGGCCAAGGA AACCTACGGC
GGGCAGACTA TTTCGACCAT TTCTTTAGGT GCCAATGGCA CGCTGACCAT TCCCGCACCA
GCATGGTAA
 
Protein sequence
MKLQQFYLYR ALVTSGIKPL LVPNGLVREG PEKQLQRQFL YWGSHTLQRI LAVILFTVFW 
LAPAAAETPR SINMKLLVVS ADGNEPVFAG IKSILNQIGI PYDTLVASKT PLTAQTLSDG
LGAGRYQGVL LTTGNLAYEA SPNNWQSAFT QAQWQMLWQY EADFRVRQAT LYTYPAGAPD
NYGLTPISAA DTSYTPLKAS LTTAGQQLFG YLNPASPVSI TGAWTYLVKP ISSGNPVSLL
NTADGYSLAS IYTYPDGRQN LAITTDGNPE LTHTLLLGYG VVNWVSKGFF LGERKVYLNA
QPDDIMIPDD IWDPVRLSDQ TGIEYRITGN DYNRLITWQN AMRASNTNAA QIELEMPYNG
VGVSGIYPND TLTAAIRSKP NQFKWISHTY EHELLTDISY TNALAQLSKN HTVAQQLGFS
KYQKDSMIQP EISGLNNPEF LRAAKDFGIR YILSDTSQPG WKNPSPNTGF YSLHQPSILI
IPRYPTNLYY NVSTPTEWLS EYNYFYAPGG LFPTWDHKLT YSELLNKESE IWLRYLLKFD
LNSVMFHQSN LRAYDNKNSL LGDLINATLA KYNSMYKLPI RSPSQHDTGL LMAARMTYND
SGVSGRIVLG TTNSIALKTV KPVKAPLTGI NYGTAKETYG GQTISTISLG ANGTLTIPAP
AW