Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1640 |
Symbol | |
ID | 4688876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1731415 |
End bp | 1733403 |
Gene Length | 1989 bp |
Protein Length | 662 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639834645 |
Product | hypothetical protein |
Protein accession | YP_981875 |
Protein GI | 121604546 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.157145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAC AACAGTTTTA CTTGTATCGT GCCCTGGTCA CAAGCGGCAT CAAACCGCTG CTTGTGCCGA ACGGCTTAGT CCGTGAGGGG CCAGAAAAGC AATTGCAGCG GCAGTTTTTG TATTGGGGGT CACACACCCT GCAACGCATC CTCGCGGTAA TTTTATTTAC CGTTTTCTGG CTTGCACCAG CCGCCGCCGA AACACCCAGG TCAATTAACA TGAAGTTGCT GGTTGTATCG GCGGATGGCA ACGAGCCGGT ATTTGCTGGC ATCAAGTCGA TTTTGAATCA GATCGGCATC CCCTACGATA CTTTGGTCGC CAGCAAAACA CCACTGACTG CGCAAACCTT GTCTGACGGA CTGGGGGCAG GACGTTATCA GGGTGTCCTT CTCACTACCG GGAATCTCGC CTATGAAGCG TCCCCGAACA ATTGGCAAAG CGCATTTACC CAAGCCCAAT GGCAAATGCT TTGGCAATAT GAAGCTGACT TTCGGGTCAG GCAGGCAACC CTGTATACCT ATCCGGCAGG CGCACCCGAC AACTATGGAC TGACGCCAAT CAGCGCCGCC GATACCAGTT ACACACCACT CAAGGCCAGT CTGACGACAG CCGGACAGCA ACTGTTCGGT TATTTGAACC CAGCCAGTCC TGTTTCCATT ACGGGTGCCT GGACTTATCT GGTCAAACCG ATTTCGAGTG GCAACCCGGT TTCTTTGTTA AACACTGCGG ACGGCTATTC CCTCGCATCC ATTTATACCT ACCCCGATGG CCGACAGAAT CTGGCTATCA CAACCGATGG AAACCCGGAA CTGACCCACA CTCTTTTGCT GGGCTATGGC GTAGTCAACT GGGTAAGCAA GGGTTTCTTT CTGGGAGAGC GCAAGGTTTA TCTAAACGCA CAACCTGATG ACATCATGAT TCCAGATGAT ATTTGGGATC CAGTGCGTTT GTCTGACCAG ACCGGGATTG AATACCGGAT AACGGGCAAT GATTACAACC GGCTCATCAC CTGGCAAAAT GCAATGCGCG CATCGAACAC GAATGCAGCG CAAATAGAGC TGGAAATGCC ATACAACGGT GTTGGGGTGT CAGGGATTTA TCCCAACGAT ACATTGACAG CTGCCATACG AAGCAAACCC AATCAATTCA AATGGATCAG CCACACTTAT GAGCACGAAT TACTGACCGA CATCAGCTAC ACCAATGCGC TGGCGCAACT CAGCAAAAAT CATACGGTGG CGCAACAGCT GGGTTTCAGC AAGTATCAAA AAGACAGCAT GATTCAACCC GAAATTTCAG GGCTGAATAA TCCCGAGTTT CTCAGGGCTG CCAAGGATTT CGGCATACGC TATATTTTGT CTGATACTTC ACAGCCCGGC TGGAAAAATC CCAGCCCCAA CACTGGTTTC TACAGCCTCC ATCAGCCCAG CATCCTGATC ATTCCGCGCT ACCCAACCAA TTTGTACTAC AACGTCTCAA CACCTACCGA GTGGCTGTCC GAGTACAACT ATTTTTATGC TCCAGGCGGT CTTTTTCCTA CTTGGGACCA CAAGCTGACC TACAGTGAAC TGCTGAATAA GGAGTCTGAA ATATGGCTCA GGTATTTGTT GAAATTCGAT CTGAATTCCG TGATGTTTCA CCAGAGCAAT CTGCGTGCCT ATGACAACAA GAATTCACTG CTGGGCGATC TGATCAATGC CACTTTGGCG AAATACAACA GCATGTACAA ACTGCCGATA CGCAGTCCAA GCCAGCATGA CACCGGACTT TTGATGGCCG CCAGAATGAC GTATAACGAC TCCGGCGTCA GTGGCCGTAT TGTGCTGGGG ACAACCAATA GTATTGCATT GAAAACGGTT AAACCGGTCA AAGCTCCCCT GACCGGGATT AACTACGGCA CGGCCAAGGA AACCTACGGC GGGCAGACTA TTTCGACCAT TTCTTTAGGT GCCAATGGCA CGCTGACCAT TCCCGCACCA GCATGGTAA
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Protein sequence | MKLQQFYLYR ALVTSGIKPL LVPNGLVREG PEKQLQRQFL YWGSHTLQRI LAVILFTVFW LAPAAAETPR SINMKLLVVS ADGNEPVFAG IKSILNQIGI PYDTLVASKT PLTAQTLSDG LGAGRYQGVL LTTGNLAYEA SPNNWQSAFT QAQWQMLWQY EADFRVRQAT LYTYPAGAPD NYGLTPISAA DTSYTPLKAS LTTAGQQLFG YLNPASPVSI TGAWTYLVKP ISSGNPVSLL NTADGYSLAS IYTYPDGRQN LAITTDGNPE LTHTLLLGYG VVNWVSKGFF LGERKVYLNA QPDDIMIPDD IWDPVRLSDQ TGIEYRITGN DYNRLITWQN AMRASNTNAA QIELEMPYNG VGVSGIYPND TLTAAIRSKP NQFKWISHTY EHELLTDISY TNALAQLSKN HTVAQQLGFS KYQKDSMIQP EISGLNNPEF LRAAKDFGIR YILSDTSQPG WKNPSPNTGF YSLHQPSILI IPRYPTNLYY NVSTPTEWLS EYNYFYAPGG LFPTWDHKLT YSELLNKESE IWLRYLLKFD LNSVMFHQSN LRAYDNKNSL LGDLINATLA KYNSMYKLPI RSPSQHDTGL LMAARMTYND SGVSGRIVLG TTNSIALKTV KPVKAPLTGI NYGTAKETYG GQTISTISLG ANGTLTIPAP AW
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