| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1632 |
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| Symbol | |
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| ID | 4688174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1719723 |
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| End bp | 1720829 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639834635 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_981867 |
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| Protein GI | 121604538 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.470105 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA CAATGGGCAA AAAAAGAATC GCGGTCATCG CAGGCGACGG CATCGGCAAG
GAAGTGATGC CTGAAGGCAT TCGTGTGCTG GAGGCCGCAG CGGTCAAGTA CGGGATTGAC
CTGCAGTTTG ATCACTTCGA TTTTTCGAGC TGGGACTATT TTGAAAAGCA CGGCAAGATG
CTGCCCGATG ACTGGAAAGA CCAGATTGGC GGGCACGATG CGATTTACTT TGGCGCCGTA
GGCTGGCCCG ACAAGATTCC CGATCATGTA TCGCTCTGGG GCTCGCTGTT GCTGTTCAGG
CGGGAGTTTG ACCAGTACAT CAACCTGCGC CCCGCGCGCT TGATGCCCGG CATCATTGCA
CCCGTGGTCA GGCGTGACGG CAGTCCGCGC CAGCCGGGCG AGATCGATTT TTACATCGTC
CGCGAGAACA CCGAAGGCGA ATATTCCAGC ATCGGCGGCA AGGCCTTTCC GGGCACCGAA
CGCGAGTTCG TGTTGCAGGA ATCGGTATTC ACCCGCATCG GCGTGGATCG TGTGCTGAAA
TTCGCCTTTG AGCTGGCGCA GTCACGCCCT AAAAAGCACT TGACCAGCGC CACCAAGTCC
AACGGCATTT CAATTTCCAT GCCCTATTGG GATGAACGTG TCGCCGAAAT GGCGAAAGGC
TATCCGGCGA TCCAGCTCGA CAAGTTTCAT ATCGACATCC TGACGGCTCA TTTTGTGCAG
CGGCCGGACT TTTTTGACGT GGTCGTGGCC AGCAACCTGT TTGGCGACAT CCTGAGCGAT
CTGGGGCCTG CCTGCACGGG AACCATCGGT ATTGCCCCCA GCGCCAATCT CAATCCGGAG
CGCAAATTTC CCTCGCTGTT CGAGCCTGTC CATGGCTCGG CGCCAGACAT TGCCGGACGC
AATCTGGCCA ATCCCATCGG GCAGATCTGG TGCGGCGCCA TGATGCTGGA ATTTTTGGGG
TACAAGGAAG CCCATGATGG CATTCTTGGC GCCATTGAGC ATGTTCTCAA ACCTCAAAAC
GGTGCGCCAC GAACGCCCGA TCTGGGCGGG CGGGCGGGTA CTGCCGATGT TGGAAAAGCT
ATTGCGAATG CATTGGGTGA ACTGTAA
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| Protein sequence | MSKTMGKKRI AVIAGDGIGK EVMPEGIRVL EAAAVKYGID LQFDHFDFSS WDYFEKHGKM
LPDDWKDQIG GHDAIYFGAV GWPDKIPDHV SLWGSLLLFR REFDQYINLR PARLMPGIIA
PVVRRDGSPR QPGEIDFYIV RENTEGEYSS IGGKAFPGTE REFVLQESVF TRIGVDRVLK
FAFELAQSRP KKHLTSATKS NGISISMPYW DERVAEMAKG YPAIQLDKFH IDILTAHFVQ
RPDFFDVVVA SNLFGDILSD LGPACTGTIG IAPSANLNPE RKFPSLFEPV HGSAPDIAGR
NLANPIGQIW CGAMMLEFLG YKEAHDGILG AIEHVLKPQN GAPRTPDLGG RAGTADVGKA
IANALGEL
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