Gene Pnap_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1623 
Symbol 
ID4687591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1710013 
End bp1711338 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content65% 
IMG OID639834626 
Producthypothetical protein 
Protein accessionYP_981858 
Protein GI121604529 
COG category[S] Function unknown 
COG ID[COG1322] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.929748 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCT TGCTGCTGGC CAACCTGCTG TTGCTGGTCT GGCTGGCGGT GCGCAAGCCG 
GCGGAAATTG CAGGCGATGG AAATGCTGAA CTGCTGAACG GCTTTGCGGA AGTCAGTGAC
CGGCTGGAGC GCGAGCTGCG GCGCGAGATC AGCGACAACT CGCGCGGCAG CCGCCAGGAA
CTGGCCGCGA CGCTGGCCAG CTTCCAGCAG GCGCTGGTGC AGCAGGGCGC CGAAGCCACC
CGCACGCAAA ACACGCAGAT CGATGCGTTT TCCCGCCAGC TCGGCCTGTT GCAGCAAAGC
CTGTCGGACA CGCTGGCGAC GCAGCTGCAG TCGGTCAGCG AATCGAACGC GCGCCGCATG
CTTGAGGTGC GTGAAACGCT GGAAAAGCAA CTCGCGCAAC TGCAGCAAAG CAACGCCGCC
AAGCTCGACG AGATGCGCCG CACGGTCGAT GAAAAGCTGC ATGACACGCT GGAAACCCGC
CTGGGCCAGA GCTTCAAGCA GGTCGCCGAC CGGCTGGAGC AGGTCCACAA GGGGCTGGGC
GAAATGCAGA CGCTGGCGCA GGGCGTCGGC GACCTCAAGC ATTTGCTGAC CAACGTGAAA
ACGCGCGGCA TTTTTGGCGA GGCGCAACTG GCAGCCTTGC TCGAACAGGT CTTCACCGTG
GACCAGTACG CCGCGCAGGT CGTCACCCGG CGCGGTGGCA AGAATCCGGT CGATTTCGCG
ATCAAGCTGC CGGGCCGTTC CGACTCGGGC GAGCCGCTGT GGCTGCCGAT TGATGCGAAA
TTTCCCAACG AAGACTATGA GCGGCTGCTC GATGCGCAGC AGCGCGCCGA CGGGCCGGGC
GCCGAGGTCG CGGGCAAGGC GCTGGAGCTG CGCATCCGCC TGGAAGCCAA GTCGATCTGC
GAAAAGTACA TCGAGCCGCC GTACACGACC GACTTCGCCA TCCTTTTCCT GCCGACCGAG
GGCCTGTACG CCGAAGTGCT GCGCCGCCCC GGCCTGATTG AATGCCTGCA GCGCGACCAC
CGCATCACGC TGGCCGGTCC GACCACGCTG CTGGCCATGC TCAATTCGCT GCAGATGGGC
TTCAGGACGC TGGCGCTGGA AAAGCGCTCC AGCGAGGTGT GGCAGGTGCT GGGCGCGGTC
AAGACCGAGT TCGGCAAGTT CGGCGACGTG CTGGCCAAGG TCAAGTCGCA GACCGAAACC
GTGCTCAACA CCCTGACCAG CGCCGAGCAG CGCAGCCGCG TCATGGGCAA GGCCTTGCGC
AGTGTCGAGG CCCTGCCCGA AGCGGATGCG GTCCGGCTGA TTCCGCTGGA CAAGGAACTC
GATTAA
 
Protein sequence
MMALLLANLL LLVWLAVRKP AEIAGDGNAE LLNGFAEVSD RLERELRREI SDNSRGSRQE 
LAATLASFQQ ALVQQGAEAT RTQNTQIDAF SRQLGLLQQS LSDTLATQLQ SVSESNARRM
LEVRETLEKQ LAQLQQSNAA KLDEMRRTVD EKLHDTLETR LGQSFKQVAD RLEQVHKGLG
EMQTLAQGVG DLKHLLTNVK TRGIFGEAQL AALLEQVFTV DQYAAQVVTR RGGKNPVDFA
IKLPGRSDSG EPLWLPIDAK FPNEDYERLL DAQQRADGPG AEVAGKALEL RIRLEAKSIC
EKYIEPPYTT DFAILFLPTE GLYAEVLRRP GLIECLQRDH RITLAGPTTL LAMLNSLQMG
FRTLALEKRS SEVWQVLGAV KTEFGKFGDV LAKVKSQTET VLNTLTSAEQ RSRVMGKALR
SVEALPEADA VRLIPLDKEL D