Gene Pnap_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1620 
Symbol 
ID4687506 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1706340 
End bp1707539 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content60% 
IMG OID639834623 
Productnicotinate phosphoribosyltransferase 
Protein accessionYP_981855 
Protein GI121604526 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1488] Nicotinic acid phosphoribosyltransferase 
TIGRFAM ID[TIGR01514] nicotinate phosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCA CCAGCCTGCT CGATACCGAC CTGTACAAGT TCACCATGAT GCAGGTGGTG 
CTGCACCAGT TTCCCGGCGC CGAGGTCGAA TATAAATTCA AGTGCCGCAA CGCCGGCGCG
CCCGGCATTG GCAACCTGGC GCCGTATGTG AACGAGATTC GCGAGGAAAT TCGCGGACTC
TGCAGGCTGC ACTTCCAGGA TGCCGAACTG GCCTACCTGA AGAGCCTGCG CTTCATCAAG
AGCGATTTTG TCGATTTCCT GGGGCTGTTC AAGCTCAACG AAAAATACCT CCATGTGGCT
GCCTTGCCGT CGGGCGAGAT TGAAATCTCG ATCAAGGGAC CGTGGCTGCA CACCATCCTG
TTTGAAATCC CGGTGCTGGC CATCGTCAAC GAGGTCTATT TCCGCAATAC CCGCAAGCAG
CCCGACCTGA GCGAGGGCCG CAAGCGCCTG GACACGAAAA TAGCGGCCTT GCAGATCGGC
GGCATCGGGG AGCTGAAAAT TGCCGACTAC GGAACGCGCC GGCGTTTCGG CAAGGCCTGG
CATGAAGAAG TTTTGCGCAC GCTGGTGACC CGCCTGGGCA CGGGCGCCGA GGGACAGCTG
GCCGGAACCA GCAATGTGCT GTTTGCCATG AAGCTGGGCT TGATTCCGCT GGGCACCATG
GCGCACGAGT ATCTGCAGGC CTGCCAGGCG CTCGGGCCGC GTTTGCGCGA CAGCCAGGTG
TTCGGCTTTG AAATGTGGGC CAAGGAATAC CGGGGCGACC TGGGCATTGC ACTGTCGGAC
GTGTATGGCA TGAATGCCTT CCTGCGCGAC TTCGACCTGT ATTTCTGCAA GCTGTTCGAC
GGCGCGCGCC ACGACAGCGG CGACCCGTTC CAGTGGGGCG AGCGCATGAT CTCGCACTAC
GTCGAAAACC GTGTCGATCC CAAGACCAAG ACGCTGATTT TCAGCGACGC GCTCACGGTG
CCCAGAACCA TCGAGCTGTA CCGGCAGTTC CGGGGCCGCT GCCAGCTGGC CTTCGGCATT
GGCACCAACC TGACCAACGA CCTGGGCTAT GAGCCGCTGC AAATCGTCAT CAAGATGGTG
CGCTGCAACG GACAGCCGGT GGCCAAGTTG TCCGACACGC CGTCCAAGAA CATGTGCGAC
GACGAAAAAT ACCTGGCTTA CCTGCGCCAG GTTTTCGAGA TTGCATCGCC AGCGGTCTAG
 
Protein sequence
MIITSLLDTD LYKFTMMQVV LHQFPGAEVE YKFKCRNAGA PGIGNLAPYV NEIREEIRGL 
CRLHFQDAEL AYLKSLRFIK SDFVDFLGLF KLNEKYLHVA ALPSGEIEIS IKGPWLHTIL
FEIPVLAIVN EVYFRNTRKQ PDLSEGRKRL DTKIAALQIG GIGELKIADY GTRRRFGKAW
HEEVLRTLVT RLGTGAEGQL AGTSNVLFAM KLGLIPLGTM AHEYLQACQA LGPRLRDSQV
FGFEMWAKEY RGDLGIALSD VYGMNAFLRD FDLYFCKLFD GARHDSGDPF QWGERMISHY
VENRVDPKTK TLIFSDALTV PRTIELYRQF RGRCQLAFGI GTNLTNDLGY EPLQIVIKMV
RCNGQPVAKL SDTPSKNMCD DEKYLAYLRQ VFEIASPAV