Gene Pnap_1619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1619 
Symbol 
ID4687189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1705889 
End bp1706242 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content65% 
IMG OID639834622 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_981854 
Protein GI121604525 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACCA CCACCACCGC CTCGGGACTG CAATACGAAG ACACCGTGCT GGGCACCGGC 
GCCATCGCCA AGGCCGGCCA ATATGTCAAG GTGCATTACA CCGGCTGGCT GTACAACGAC
GGCGTGCAGG GCAAGAAATT CGACTCCAGC AAGGACCGCG GCCAGCCCTT CCAGTTCTCG
CTCGGCGCTG GCGAAGTGAT TCGTGGCTGG GACGAAGGCG TGCAGGGCAT GTCGGTCGGC
GGCACGCGCC GCCTGGTCAT TCCCTCGGAA CTCGGCTACG GCGCGCGCGG TGCGGGCGGC
GTGATTCCGC CGAACGCGAC CCTGCTGTTT GAAGTGGACT TCCTGGGAAC CTGA
 
Protein sequence
MTTTTTASGL QYEDTVLGTG AIAKAGQYVK VHYTGWLYND GVQGKKFDSS KDRGQPFQFS 
LGAGEVIRGW DEGVQGMSVG GTRRLVIPSE LGYGARGAGG VIPPNATLLF EVDFLGT