Gene Pnap_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1615 
Symbol 
ID4687412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1701789 
End bp1702562 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content64% 
IMG OID639834618 
Productnitroreductase 
Protein accessionYP_981850 
Protein GI121604521 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00251246 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACCAA CCCATTCTTC CCACCCTGTC GTGGCTGGCG ATTTTGCCCC TGACGATGCG 
CCTGCCAGCG CCTGCCAGCC GCCCGTCAAC GCGGTGGATC ATGCGATAGA AAGCCGTCAG
TCGATGCGCG AGTTTTTGCC GACGCCGGTG CCCCGGGCAA CCATCCTGCA TCTGCTCGAA
CTCGCCAGCC GCGCCCCGTC GGGCACGAAC ACCCAGCCGT GGAAAGCCTA TGTGCTGCAG
GGCGCCAGCA AGGACAGCTT GAGCGAGAAG GTCTGCCAGG CGCATGACGC GCTGCGCGAC
AACCCGGCGC TGGCTTCCGA ATACAGGGAA GAGTACGACT ACTACCCGGA AAAATGGGTG
TCGCCTTACA TTGACCGCCG GCGCGAAAAC GGCTGGGGCC TGTATGGGCT GCTGGGCATC
ACCAAGGGCG ACAAGGACAA GATGCATGCG CAGCACCAGC GCAACTACCG GTTTTTCGAT
GCGCCGGTGG GCCTGATGTT CACGCTGGAC CGGGTGATGG GCCGGGGCTC GCTGCTGGAC
TACGGCATGT TCATGGAAAA CTTCATGATC GCCGCGCGCG GCCACGGCCT GCACACCTGC
CCGCAGGCCG CGTGGAACGG CTTTGCGAAA ATCATCCTGC CGCACATCGG CGCGGGCGAG
GGCGAGATGC TGGTGTGCGG CATTTCACTG GGCTATGCCG ACGAATCGGC GCTCGTCAAC
ACCTTTCGCA CGCCGCGCGT GAGCGCGGCG GAGTTCACGA CCTGGCTAGA TTGA
 
Protein sequence
MKPTHSSHPV VAGDFAPDDA PASACQPPVN AVDHAIESRQ SMREFLPTPV PRATILHLLE 
LASRAPSGTN TQPWKAYVLQ GASKDSLSEK VCQAHDALRD NPALASEYRE EYDYYPEKWV
SPYIDRRREN GWGLYGLLGI TKGDKDKMHA QHQRNYRFFD APVGLMFTLD RVMGRGSLLD
YGMFMENFMI AARGHGLHTC PQAAWNGFAK IILPHIGAGE GEMLVCGISL GYADESALVN
TFRTPRVSAA EFTTWLD