Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1615 |
Symbol | |
ID | 4687412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1701789 |
End bp | 1702562 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639834618 |
Product | nitroreductase |
Protein accession | YP_981850 |
Protein GI | 121604521 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00251246 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACCAA CCCATTCTTC CCACCCTGTC GTGGCTGGCG ATTTTGCCCC TGACGATGCG CCTGCCAGCG CCTGCCAGCC GCCCGTCAAC GCGGTGGATC ATGCGATAGA AAGCCGTCAG TCGATGCGCG AGTTTTTGCC GACGCCGGTG CCCCGGGCAA CCATCCTGCA TCTGCTCGAA CTCGCCAGCC GCGCCCCGTC GGGCACGAAC ACCCAGCCGT GGAAAGCCTA TGTGCTGCAG GGCGCCAGCA AGGACAGCTT GAGCGAGAAG GTCTGCCAGG CGCATGACGC GCTGCGCGAC AACCCGGCGC TGGCTTCCGA ATACAGGGAA GAGTACGACT ACTACCCGGA AAAATGGGTG TCGCCTTACA TTGACCGCCG GCGCGAAAAC GGCTGGGGCC TGTATGGGCT GCTGGGCATC ACCAAGGGCG ACAAGGACAA GATGCATGCG CAGCACCAGC GCAACTACCG GTTTTTCGAT GCGCCGGTGG GCCTGATGTT CACGCTGGAC CGGGTGATGG GCCGGGGCTC GCTGCTGGAC TACGGCATGT TCATGGAAAA CTTCATGATC GCCGCGCGCG GCCACGGCCT GCACACCTGC CCGCAGGCCG CGTGGAACGG CTTTGCGAAA ATCATCCTGC CGCACATCGG CGCGGGCGAG GGCGAGATGC TGGTGTGCGG CATTTCACTG GGCTATGCCG ACGAATCGGC GCTCGTCAAC ACCTTTCGCA CGCCGCGCGT GAGCGCGGCG GAGTTCACGA CCTGGCTAGA TTGA
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Protein sequence | MKPTHSSHPV VAGDFAPDDA PASACQPPVN AVDHAIESRQ SMREFLPTPV PRATILHLLE LASRAPSGTN TQPWKAYVLQ GASKDSLSEK VCQAHDALRD NPALASEYRE EYDYYPEKWV SPYIDRRREN GWGLYGLLGI TKGDKDKMHA QHQRNYRFFD APVGLMFTLD RVMGRGSLLD YGMFMENFMI AARGHGLHTC PQAAWNGFAK IILPHIGAGE GEMLVCGISL GYADESALVN TFRTPRVSAA EFTTWLD
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