| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1602 |
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| Symbol | |
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| ID | 4686619 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1686580 |
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| End bp | 1687572 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639834605 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_981837 |
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| Protein GI | 121604508 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | [TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0121004 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACAA GAGACAAGCA CATGCGTACA AGCATCAAGG GGCTTTTTTG CCTGTCAATC
GTCCTGGCTG CCGGCATGGG CCTGGCCCAG ACCCGGCTGC GCGCCTGGAA TATTCATCCC
GATGGCTATC CGGTCACCGA GGCCATGAAA AGCTTTGCCG CAGAGGTGGC AAAAACCACC
CAGGGCAAGT ACCAGATCGA GATTTTCTCC AACGCCGCGC TGGGCGACCA GCCCAAGGCG
GTGCAGATGC TCAAGGCCGG GGAAATCGAC ATTGCCGAAT TCAGCGCAGG CCCTCTGTCC
GATGCGGTGC CCGGCATCAA GGTGCTGAAC CTGCCGTTTC TGTTCACCGA TTCGGCGCAC
ATGTTCCGGC ACCTGGACGG CAAGCTGGGC CAGCGTTTTG CCGCCAGCCT GAAGGCGGCC
GGCTTCGTGG TGCTGGGCTG GTATGACGGC GGCGCCCGTT CCTTTTATTG CGCCAGCCGG
ACGGTGACGA ACGTCAGGGA ATTGGCGGGC GCCAACATCC GGGTGCAGCA GTCCGAGATT
TACACCGAAA TGGTCAAGCT GCTCAATGCC CGGCCCGTGG CCTTGCCCTA CAAGGATGTG
CTCGATGGCC TGCAGCAGGG CAAGATCGAT TGCGCGGAAA ACAACATGCC TTCGTACGAG
TCCACCGGCC ATTACAAGGT CGCCAAGAAT GTCTTCGTCA CCAACCATGT GATTTCGCCC
GAAGCGCTGG TGGTGTCCAC CCAGCTCTGG AGCAAGCTCG GCCAGGAAGA GCAGGCCGCT
TTTTCAGCAG CGGGCGCCCG GTCGGCCTTG CTGATGCGCG AGTTATGGAG CAAGCGGGTG
GCCCTGGCGC TTGAAGTCAC TGCGGGGCAG GGCGTGCAGT TCGTCAAGGT CAAGGACACG
TCGTCGATGA TCCGGCGGAT GTCGCCGCTG TACGACCGCT ACATGAAAGA CCCGACCACC
CGGCAGGAGT TGCTGAGCAT CATTGCGCAA TGA
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| Protein sequence | MATRDKHMRT SIKGLFCLSI VLAAGMGLAQ TRLRAWNIHP DGYPVTEAMK SFAAEVAKTT
QGKYQIEIFS NAALGDQPKA VQMLKAGEID IAEFSAGPLS DAVPGIKVLN LPFLFTDSAH
MFRHLDGKLG QRFAASLKAA GFVVLGWYDG GARSFYCASR TVTNVRELAG ANIRVQQSEI
YTEMVKLLNA RPVALPYKDV LDGLQQGKID CAENNMPSYE STGHYKVAKN VFVTNHVISP
EALVVSTQLW SKLGQEEQAA FSAAGARSAL LMRELWSKRV ALALEVTAGQ GVQFVKVKDT
SSMIRRMSPL YDRYMKDPTT RQELLSIIAQ
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