| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1598 |
|---|
| Symbol | |
|---|
| ID | 4686172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1682247 |
|---|
| End bp | 1683686 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639834601 |
|---|
| Product | aldehyde dehydrogenase |
|---|
| Protein accession | YP_981833 |
|---|
| Protein GI | 121604504 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCAGA AACACGACAA CCTGATCGGC GGCCAATGGC TGGCCGGCAG CAACTACACG
CCCAACCTCA ACCCTTCCAA CCTGGGCGAT GTGATCGGCG AGTACACGCA AGCCAGCGCC
GAGCAACTCG ACGCCGCCGT GCAAGCCGCG CGCGCCGCCT TTCCCGCCTG GTCCACTTCG
GGCATTCAGG CGAGGGCCGA TGCGCTCGAC AAGATCGGCA CCGAAATCCT GGCGCGCCGC
GAGGAACTGG GCACGCTGCT GTCCCGCGAG GAAGGCAAGA CCCGGCCCGA AGGCATTGGC
GAGGCGACCC GCGCCGGCAA CATCTTCAAG TTTTTCGCCG GCGAATGCCT GCGCCTGACG
GGCGAAGTCG TGCCGTCGGT GCGCCCCGGC ATCGGCGTGG AAATCACGCG CGAGCCGGTC
GGCGTCGTCG GCATCATCAC GCCGTGGAAT TTCCCCATCG CCATTCCGGC TTGGAAAATC
GCCCCGGCGC TGGCCTACGG CAATTGCGTC GTCATGAAGC CCGCCGACCT GGTGCCGGGC
TGCGCCTGGG CGCTGGCCGA GATCATCAGC CGCAGCGGCA TTCCGGCCGG CGTGTTCAAT
TTGGTGATGG GCCGGGGCAG CGTGATCGGC GACCCGCTGG TCAACCATCC CGGGGTCGAT
GCCATCAGCT TCACCGGCTC GCAGGGCGTG GGCGCGCGCA TCGCCCAGCA GTGCGCCGTC
ACCCTCAAGA AAATCCAGCT GGAAATGGGC GGCAAGAACC CGCAGGTCAT CCTGGACGAT
GCCGACGTGG CCCAGGCGGT CGAGCTCAGC GTGCAGAGCG CTTTTTTCTC CACCGGCCAG
CGCTGCACCG CGTCAAGCCG GTTGATCGTG ACCGAAGGCA TCTACCCGAA ATTTGTCGAG
GCGATGAAGG TCCGCATGGC TGGACTCAAG GTGGGCGATG CACTGGCCGC CGGCACGGAC
ATCGGCCCGG TGTCGTCGCT CTCGCAACTG GAGCAGGACC TCTCGTATGT CGATATCGGC
CAGGCCGAAG GCGCGGTGCT GCTGGCCGGC GGCGAGCGCC TGAAGCTGCC CACCGACGGC
TTTTTCATGG CCCCCGCGCT GCTGACCGAC ACCACGGCCG GCATGCGCAT CAACCGCGAG
GAAGTGTTCG GCCCGGTCGC CAGCATCATC CGCGTCAAGG GCTACGAGGA AGCGCTGTTT
GAGGCCAACA ACACGCCGTT CGGCCTGGCC GCCGGCATCG CCACGACCAG CCTGAAGCAC
GCGACCCACT TCAAGCGCCA CAGCCAGGCC GGCATGGTCA TGGTGAACCT GCCGACGGCC
GGCGTGGACT ACCACGTCCC GTTTGGCGGC CGCAAGGGTT CGAGCTACGG CTCGCGCGAG
CAGGGCCGTT ATGCGCAGGA GTTTTTCACC ATCGTCAAGA CCGCCTACAC GCTGCCTTGA
|
|---|
| Protein sequence | MTQKHDNLIG GQWLAGSNYT PNLNPSNLGD VIGEYTQASA EQLDAAVQAA RAAFPAWSTS
GIQARADALD KIGTEILARR EELGTLLSRE EGKTRPEGIG EATRAGNIFK FFAGECLRLT
GEVVPSVRPG IGVEITREPV GVVGIITPWN FPIAIPAWKI APALAYGNCV VMKPADLVPG
CAWALAEIIS RSGIPAGVFN LVMGRGSVIG DPLVNHPGVD AISFTGSQGV GARIAQQCAV
TLKKIQLEMG GKNPQVILDD ADVAQAVELS VQSAFFSTGQ RCTASSRLIV TEGIYPKFVE
AMKVRMAGLK VGDALAAGTD IGPVSSLSQL EQDLSYVDIG QAEGAVLLAG GERLKLPTDG
FFMAPALLTD TTAGMRINRE EVFGPVASII RVKGYEEALF EANNTPFGLA AGIATTSLKH
ATHFKRHSQA GMVMVNLPTA GVDYHVPFGG RKGSSYGSRE QGRYAQEFFT IVKTAYTLP
|
|---|
| |