| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1597 |
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| Symbol | |
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| ID | 4686516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1680606 |
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| End bp | 1682204 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639834600 |
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| Product | galactarate dehydratase |
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| Protein accession | YP_981832 |
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| Protein GI | 121604503 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAT TGCCAAGCTC TCAGCCCCGC TACATCCTCA TGCACGAGGC CGACAACGTG
GCCATCGTCG TGAATGACGG CGGCCTGCCT GCGGGCACCG TTTTTGCCTC CGGGCTGACA
TTGCGCGACA AGGTGCCGCA AGGCCACAAG GTCGCGTTGG TCGATTTGCC ACAGGGCAGC
ACCGTGCGGC GCTACAACGT GCCCATCGGC TACGCCCTGA AGGACATCCC GGCCGGCAGT
TGGGTGCACG AGCGGCTGCT GGACATGCCG GCCGCGCGCG GGCTGGACAA CCTGCCCATC
GCCACCGTCA AGCCCGAGCC CTTGCCGCCG CTGGAAGGCT ACACCTTCGA GGGCTACCGC
AATGCCGATG GCTCGGTGGG CAGCCGCAAC ATCCTGGCCA TCACCACCAC CGTGCAGTGC
GTGGCCGGCG TGGTCGAGTT TGCCGTCAAG CGCATCAAGG ACGAGCTGCT GCCGCGTTTC
CCGAATGTGG ACGACGTGGT GGGGCTGGAG CACAGCTACG GCTGCGGGGT GGCGATTGAC
GCGCCCGATG CGATCATCCC GATCCGCACC CTGCGCAACA TCACGCTGAA CCCGAACTTC
GGCGGCGAAG TGATGGTGGT CAGCCTGGGT TGCGAAAAGC TGCAGCCCGA GCGCCTGCTG
CCGCCCGGCA CCATACCGAT CATGGATGAG CGCAACGTGG CCGATGTGGG CGTCACTGCG
GAGGCGCCGC TCGATGTGGT GTGCCTGCAG TCCGAACAGC ATGTCGGCTT CATGTCGATG
ATCGACTCGA TCATGAGCGC GGCCGAGCTG CACCTGGAGC GGCTCGATGC GCGCCGGCGC
GAAACCGTGC CGGCCAGTGA GCTGGTGGTC GGCGTGCAGT GCGGCGGCAG CGATGCGTTC
TCGGGCGTGA CCGCCAATCC GGCGGTCGGT TTTTGCACCG ACCTGCTGGT GCGCGCCGGC
GCCACGGTGA TGTTCTCCGA AACCACCGAA GTGCGCGACG GCATCGACCA GCTCACGGCG
CGCGCCACGA CGCCCGAAGT CGCCGAGGCG ATGATCCGCG AGATGGCCTG GTACGACGCC
TACCTGGAAA AAGGCCGCGT GGACCGCAGC GCCAACACCA CGCCGGGCAA CAAGAAGGGC
GGGTTGTCCA ACATTGTCGA AAAAGCCATG GGCTCGATCG TCAAGTCGGG CAGCGCGCCC
ATCAGCGGCG TGCTGTCGCC GGGCGAAAAG GTCCGGCAAA AAGGCCTGAA GGGATTGGTG
TTTGCCGCCA CACCGGCCAG CGATTTCATC TGCGGCACGC TGCAGCTGGC TGCCGGCATC
AACCTGCATG TGTTCACCAC CGGACGCGGA ACGCCCTACG GGCTGGCCGA GGTGCCGGTG
ATCAAGGTGG CGACCCGCAC CGACCTGGCG CGGCGCTGGC ATGACCTGAT GGACATCAAC
GCCGGCCGCA TTGCCGATGG CGACGCGACG ATTGAAGACG TGGGCCGCGA GCTGTTCCAG
TTCATGCTCG ACGTGGCCAG CGGCCGCAAG AAAACCTGGG CCGAGCACTG GAAGCTGCAC
AACGCCCTGG TGCTCTTCAA CCCGGCGCCC GTGACGTGA
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| Protein sequence | MTALPSSQPR YILMHEADNV AIVVNDGGLP AGTVFASGLT LRDKVPQGHK VALVDLPQGS
TVRRYNVPIG YALKDIPAGS WVHERLLDMP AARGLDNLPI ATVKPEPLPP LEGYTFEGYR
NADGSVGSRN ILAITTTVQC VAGVVEFAVK RIKDELLPRF PNVDDVVGLE HSYGCGVAID
APDAIIPIRT LRNITLNPNF GGEVMVVSLG CEKLQPERLL PPGTIPIMDE RNVADVGVTA
EAPLDVVCLQ SEQHVGFMSM IDSIMSAAEL HLERLDARRR ETVPASELVV GVQCGGSDAF
SGVTANPAVG FCTDLLVRAG ATVMFSETTE VRDGIDQLTA RATTPEVAEA MIREMAWYDA
YLEKGRVDRS ANTTPGNKKG GLSNIVEKAM GSIVKSGSAP ISGVLSPGEK VRQKGLKGLV
FAATPASDFI CGTLQLAAGI NLHVFTTGRG TPYGLAEVPV IKVATRTDLA RRWHDLMDIN
AGRIADGDAT IEDVGRELFQ FMLDVASGRK KTWAEHWKLH NALVLFNPAP VT
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