| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1594 |
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| Symbol | |
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| ID | 4686495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1677772 |
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| End bp | 1678326 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639834597 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_981829 |
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| Protein GI | 121604500 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.974575 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAGCG CTTCGTCCCT GTGTTGGGGG CGGGCGCCGC GACAAGGCAA GGCGAAAAAC
ATGAACTTCT ATACAAAATT TTGCGCGATG CTGTCCAAGA TCAGCCTGAT CCTGGCCGTC
ATAGGACTGC TCGCAGTCGT CCTGTGCGTG CAGTGGCAGG TAATCGGGCG TTACGTCCTG
AACGACACGC CCACCTGGGC CGAGGCGCTG GCCCTGCTGC TGGTGCTGTT CGTCACGGCC
TTCGGCCTGG CGGTCGGTGT GCGTGACGCC GGCCACATCG GCCTGGAATC GCTGGTCGTA
CTCTTGCCCG AAAAATGGCA GCACCGCATT GAAATCCTGA TTCATGGGCT GGTCGGCCTC
TTCGGCGCGC TGATGGTGCA TGGTGGCTGG CTCTGGATGA TGGCCAAGTG GAACGAGAAA
AAACCCATGA TGCCCGTCCC CGATGGCATC GATTACCTGC CGCTGGTGAT TGCCGGCGTG
CTGATCGTGC TGTTTTCAAT TGAACATATC ATCGCGCTGC TGCGCGGCCA AGTCGTGGAG
CCAGCATGGA ACTGA
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| Protein sequence | MGSASSLCWG RAPRQGKAKN MNFYTKFCAM LSKISLILAV IGLLAVVLCV QWQVIGRYVL
NDTPTWAEAL ALLLVLFVTA FGLAVGVRDA GHIGLESLVV LLPEKWQHRI EILIHGLVGL
FGALMVHGGW LWMMAKWNEK KPMMPVPDGI DYLPLVIAGV LIVLFSIEHI IALLRGQVVE
PAWN
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