| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1574 |
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| Symbol | |
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| ID | 4688035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1661636 |
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| End bp | 1663231 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639834577 |
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| Product | nitrogenase cofactor biosynthesis protein NifB |
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| Protein accession | YP_981809 |
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| Protein GI | 121604480 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR01290] nitrogenase cofactor biosynthesis protein NifB |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.274095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.786135 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAA GCGCAAACAC CGGTTCCATG CCCGCCACAA CCTATGTCAG CATAGGTCAG
ATCAAACCCC TGGGGGCCGC ACTCGAACTG CCGAAAAGCG GTGGCGGCTG CGATACGCTC
GATGACGAAA GCAAGGCTAC TTGCGGAACG TCAGCCGGCC CCGACGACAT GCCGCTAGAG
ATCTGGGACA AGGTCAAGAA TCACCCTTGC TACTCCGAAG AAGCTCACCA TCACTATGCC
CGGATGCACG TTGCCGTCGC GCCCGCCTGC AACATCCAGT GCAATTACTG CAACCGCAAA
TACGACTGCA GCAACGAATC GCGCCCCGGC GTGGTCTCGC AAAAGCTGAC GCCCGAGCAG
GCGGTGAAAA AAGTCGTGGC CGTGGCCAGC GAGATTCCGC AAATGACGGT GCTTGGCGTG
GCCGGCCCCG GCGATTCGCT GGCGAACCCG AAAAAGACCT TCGACACCTT CCGCATGCTG
CAGGAGCAGG CGCCCGACAT CAAGCTGTGC ATGTCCACCA ACGGCCTGGC GCTGCCCGCG
CTGGTCGATG AAATCTGCCA GTACAACATC GACCACGTCA CCATCACCAT CAACATGGTG
GACCCGGCCA TCGGCGAAAA AATCTATCCG TGGATTTTCT GGAACCACAA GCGCGTCACC
GGCTACGAAG CCTCCAGGAT CCTGCACGAG CAGCAGATGC TCGGCCTGGA GATGCTCACC
GCGCGCGGCG TGCTGACCAA GATCAACTCG GTGCTGATTC CCGGCATCAA CGACGAGCAC
CTGATCGAAG TCAACCGCGA AGTGAAAAAG CGCGGCGCCT TCCTGCACAA CATCATGCCG
CTGATCTCCG AAGCCGAGCA TGGCACGGTG TTCGGCCTGA CCGGCCAGCG CGGCCCCTCG
GCCTCCGAAC TCAAGGCCGT GCAGGACGCC TGCATGGGTG GCGCCAACCT GATGCGCCAC
TGCCGCCAGT GCCGCGCCGA TGCCGTCGGC CTGCTGGGCG AAGACCGCAG CGAAGAGTTC
ACCATGGACA AGCTCGAACA GATGGAAGTC GTCTATGACC TGGGCAAGCG CAAGACCTAC
CAGGACAAGG TCGAGGTCGA GCGCCAGGCC CAGCACGCCG CCAAGCAGGA AGCGCTGGCT
GCGTCCAGCG CCCTGATGGC CGGCGATGAC CTGCAGGTTC TGGTGGCCGT GGCCACCAAG
GGCGGCGGCC GCGTCAACGA GCACTTCGGC CACGTCACCG AATTCCAGGT CTTCCAGGTC
TCGGCCGCCG AAGCGCTGTT CGTCGGCCAC CGCCGCGTGG ACCAGTATTG CCAGGGCGGC
GAGGGCGACG ACGAGCAGCT GCCGTCGGTG GTTCGCGCCA TCAACGACTG CCATGCGGTG
CTGGTCGCCA AGATCGGCGC CTGCCCGAAA GACGACCTGA CCGCCGCCGG CATCGAGGCG
GTTGACCAGT ATGTCGGCGA GTTCATTGAA AAAGCCGCGC TGGAATGGTT CAACGACTAC
CGCAGCCGCA TCGCCAGCGG CGCCGTGGTT CACCAGAACC GTGGCGACGC GCAGATTCGC
CAGGGCGCTT TCACCGGCCT GGCCGAAGCC GCCTAA
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| Protein sequence | MQASANTGSM PATTYVSIGQ IKPLGAALEL PKSGGGCDTL DDESKATCGT SAGPDDMPLE
IWDKVKNHPC YSEEAHHHYA RMHVAVAPAC NIQCNYCNRK YDCSNESRPG VVSQKLTPEQ
AVKKVVAVAS EIPQMTVLGV AGPGDSLANP KKTFDTFRML QEQAPDIKLC MSTNGLALPA
LVDEICQYNI DHVTITINMV DPAIGEKIYP WIFWNHKRVT GYEASRILHE QQMLGLEMLT
ARGVLTKINS VLIPGINDEH LIEVNREVKK RGAFLHNIMP LISEAEHGTV FGLTGQRGPS
ASELKAVQDA CMGGANLMRH CRQCRADAVG LLGEDRSEEF TMDKLEQMEV VYDLGKRKTY
QDKVEVERQA QHAAKQEALA ASSALMAGDD LQVLVAVATK GGGRVNEHFG HVTEFQVFQV
SAAEALFVGH RRVDQYCQGG EGDDEQLPSV VRAINDCHAV LVAKIGACPK DDLTAAGIEA
VDQYVGEFIE KAALEWFNDY RSRIASGAVV HQNRGDAQIR QGAFTGLAEA A
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