Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1556 |
Symbol | |
ID | 4688873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1643429 |
End bp | 1643968 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 639834559 |
Product | tripartite ATP-independent periplasmic transporter DctQ |
Protein accession | YP_981791 |
Protein GI | 121604462 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0707122 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAAAA AGTTGATCGA TGGTTATTGC CAGCTCATCA GCTACCTGAT TGCCGCAGCC CTGGCGGTGA TGGTCGTGCT GGTGTTCGGC AACGTGTTCA TGCGCTATGC CTTCGACTCG GGCTTCATCC TGTCCGAAGA GTTGTCCCGC TGGCTGTTTG TCTGGCTGAC CTTCCTGGGC GCGATCGTGG CGGTGCGCGA CAACGGCCAC CTGGGCACCG ACATGCTGGT GGGACGCCTG GGGCCATTGG GCAAGAAAGT CTGCATGGGC CTGTCGCTGG TGCTGATGCT GTTTTGCCTG TGGCTGCTGT TCAAGGGCTC CTACGACCAG ACGGTCATCA ACTGGGAAAC GACCAGCGCG GTGATGGAAG TCTCGATGAG CTGGTTCTAT GCCTCGGGCA TGGTGTTTTC CGTGCTGAGC GCGCCGATTT TGCTGGGCAA CCTGTGGCGC CTGCTGAGCG GCCAGATCGA CGACGAGCAC CTGCTCTTGA TGCAGGAATC CGAAGACGCT CCCCACGGCG ATGCCGGCAA ATCCCACTAA
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Protein sequence | MIKKLIDGYC QLISYLIAAA LAVMVVLVFG NVFMRYAFDS GFILSEELSR WLFVWLTFLG AIVAVRDNGH LGTDMLVGRL GPLGKKVCMG LSLVLMLFCL WLLFKGSYDQ TVINWETTSA VMEVSMSWFY ASGMVFSVLS APILLGNLWR LLSGQIDDEH LLLMQESEDA PHGDAGKSH
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