Gene Pnap_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1533 
Symbol 
ID4686199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1622829 
End bp1623311 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content66% 
IMG OID639834536 
Productdiheme cytochrome c 
Protein accessionYP_981768 
Protein GI121604439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATTCC GGTTTCCCTC ACTCTCCACC AAAGTCCTGT TCGGCGTGCT TGCCACCATC 
TGCGCCACGC AGGCGGCGAT GGCCGATGGC GACAGGCGCA TGGTGCCGCT GCTGCCCCAA
TACAAGCAGG AATGCGCCGC CTGCCACCTG GCGTATCCGC CCGGCATGCT GCCGGCGGCC
TCGTGGAAAC GGGTCATGGC GGGCCTGCCC AAACACTACG GAACCGACGC GTCGCTCGAC
CCGGCGACGG TCAAGGAGCT TTCCACCTGG CTGGGCGCCA ACGCCGGCAC CTACAAGCGC
GTCAGCGAAG AGCCGCCGCA GGACCGCATC ACCACGTCAA GCTGGTTCGA GCGCAAGCAT
CGGGAAGTAG CGCCCGATAC CTGGAAACGG GCCGCCATCG GCAGCCGGGC CAACTGCGCC
GCCTGCCACA CCCGCGCCGA CAAGGGCGAC TTCGACGAAG ACAACGTCCG CATTCCGAAA
TAA
 
Protein sequence
MSFRFPSLST KVLFGVLATI CATQAAMADG DRRMVPLLPQ YKQECAACHL AYPPGMLPAA 
SWKRVMAGLP KHYGTDASLD PATVKELSTW LGANAGTYKR VSEEPPQDRI TTSSWFERKH
REVAPDTWKR AAIGSRANCA ACHTRADKGD FDEDNVRIPK