Gene Pnap_1526 details

Gene Information

• Locus tag: Pnap_1526
• Symbol: dnaK
• ID: 4688096
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas naphthalenivorans CJ2
• Kingdom: Bacteria
• Replicon accession: NC_008781
• Strand: -
• Start bp: 1616295
• End bp: 1618238
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639834529
• Product: molecular chaperone DnaK
• Protein accession: YP_981761
• Protein GI: 121604432
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 28
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAAGAA TCATCGGTAT CGACTTGGGC ACGACCAACA GCTGCGTCTC CATCATGGAG 
GGCAACACGC CCCGCGTCAT TGAAAACTCG GAAGGCGCCC GCACCACCCC GTCCATCGTT 
GCCTACCAGG AAGATGGCGA AGTATTGGTC GGCGCATCGG CCAAGCGCCA GGCCGTGACT 
AATCCCAAGA ACACGCTCTA CGCCGTCAAG CGCCTGATCG GCCGCAAGTT CACCGAAAAA 
GAAGTGCAAA AAGACATCGG CCTGATGCCT TACTCCATCG TGCCCGCCGA CAACGGCGAC 
GCCTGGATTG AAGTGCGTGG CAAAAAGCTG TCGGCCCAGC AGGTCAGCGC CGACATCCTG 
CGCAAGATGA AGAAAACCGC CGAAGACTAC CTCGGCGAGC CCGTCACCGA AGCCGTGATC 
ACCGTGCCCG CGTACTTCAA TGACGCCCAG CGCCAGGCGA CGAAAGACGC CGGCCGCATC 
GCCGGCCTCG ATGTCAAGCG CATCATCAAC GAACCCACCG CAGCCGCGCT GGCCTTTGGC 
CTGGACAAGC AGGAAAAGGG CGACCGCAAG ATTGCCGTCT ATGACCTGGG CGGCGGCACC 
TTCGACATCT CGATCATCGA GATTGCCGAT GTCGATGGCG AAAAGCAGTT TGAAGTGCTG 
TCCACCAACG GCGACACCTT CCTCGGCGGC GAAGACTTCG ACCAGCGCAT CATCGACTTC 
ATCATCGACG AGTTCAAGAA GGACTCCGGC GTCAACCTCA AGAACGACGT GCTGGCCCTG 
CAGCGCCTGA AGGAAGCCGC TGAAAAAGCC AAGATCGAGC TGTCCAACAG CGCGCAGACC 
GACATCAACC TGCCTTACAT CACCGCTGAC GCTTCAGGCC CGAAACACCT GAACATCAAG 
ATGACCCGCG CCAAGCTCGA AAGCCTGGTC GAGGAACTCA TCGAGCGCAC GATTGCCCCT 
TGCCGCGTGG CCGTCAAGGA CGCCGGCGTG AGCGTTGGCG ACATCCATGA CGTGATCCTG 
GTCGGCGGCA TGACGCGCAT GCCCAAGGTG CAGGAAAAGG TCAAGGAATT CTTCGGCAAG 
GAACCGCGCA AGGACGTGAA CCCCGACGAA GCCGTGGCCG TTGGCGCCGC GATTCAGGGC 
CAGGTGCTGT CGGGCGACCG CTCCGACGTG CTGCTGCTCG ACGTGACGCC GCTGTCCCTG 
GGCATCGAAA CCATGGGCGG CGTGATGACC AAGATGATCA AGAAGAACAC GACCATCCCG 
ACCAAGTTCG CCCAGACCTT CTCGACCGCT GAAGACAACC AGCCGGCCGT GACGATCAAG 
GTATTCCAGG GCGAGCGCGA GATTGCCTCG GGCAACAAGG CACTCGGCGA GTTCAACCTC 
GAAGGCATTC CGCCAGCATC GCGCGGCACG CCGCAGATCG AAGTGTCGTT CGACATCGAC 
GCCAACGGCA TCCTGCACGT CGGCGCCAAG GACAAGGGCA CCGGCAAGGA AAACAAGATC 
ACCATCAAGG CCAACTCCGG CCTGACCGAA GCTGAAATCC AGCAGATGGT GAAGGACGCC 
GAACTGAACG CCGAGGACGA CAAGAAAAAG GTCGAGTTCG TGCAGGCCAA GAACAGCGCC 
GAAGCCATGG TCCACAGCGT GAAAAAATCG CTGGGCGAGT ATGGCGACAA GCTCGATGCC 
GGCGAAAAGG CAAAAATCGA AGCCGCCATC AAGGACATGG AAGAAGCCCT CAAGAGCGAC 
GACAAGGCCG CGATTGAAGC CAAGAACGCC GCCCTGATGG AAGCCAGCCA GAAGCTCGGC 
GAAAAGATGT ATGCCGACAT GCAGTCGTCG CAAGCCGCTG GCGGCGACGC AGGCGCGGCA 
GCCGGTGCCG AACACGCCCA GGCCAAGCCC GCTGCCGACG ACAATGTGGT GGATGCCGAA 
GTCAAGGAAG TCAAGAAGGG CTGA 

 

Protein sequence

MGRIIGIDLG TTNSCVSIME GNTPRVIENS EGARTTPSIV AYQEDGEVLV GASAKRQAVT 
NPKNTLYAVK RLIGRKFTEK EVQKDIGLMP YSIVPADNGD AWIEVRGKKL SAQQVSADIL 
RKMKKTAEDY LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLDVKRIIN EPTAAALAFG 
LDKQEKGDRK IAVYDLGGGT FDISIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDF 
IIDEFKKDSG VNLKNDVLAL QRLKEAAEKA KIELSNSAQT DINLPYITAD ASGPKHLNIK 
MTRAKLESLV EELIERTIAP CRVAVKDAGV SVGDIHDVIL VGGMTRMPKV QEKVKEFFGK 
EPRKDVNPDE AVAVGAAIQG QVLSGDRSDV LLLDVTPLSL GIETMGGVMT KMIKKNTTIP 
TKFAQTFSTA EDNQPAVTIK VFQGEREIAS GNKALGEFNL EGIPPASRGT PQIEVSFDID 
ANGILHVGAK DKGTGKENKI TIKANSGLTE AEIQQMVKDA ELNAEDDKKK VEFVQAKNSA 
EAMVHSVKKS LGEYGDKLDA GEKAKIEAAI KDMEEALKSD DKAAIEAKNA ALMEASQKLG 
EKMYADMQSS QAAGGDAGAA AGAEHAQAKP AADDNVVDAE VKEVKKG