| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1522 |
|---|
| Symbol | |
|---|
| ID | 4686614 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1609702 |
|---|
| End bp | 1611423 |
|---|
| Gene Length | 1722 bp |
|---|
| Protein Length | 573 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639834525 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit D |
|---|
| Protein accession | YP_981757 |
|---|
| Protein GI | 121604428 |
|---|
| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0664995 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGA CAAGTTCCCT GAACCAGGCG ATGGCGCCGC TGATGCCGCA CCTGATGCTG
GCGCCCATCT TGCTGCCCCT GCTCACTGCC GCGCTGATGC TGCTGATGCG GGAAGACAGG
CAGCGCTTCA AGCTGATCGT CAACATGGGC TCGACCCTGC TGGGCCTTGG CGTGTCGCTG
GCCCTGCTGG GCTGGGCCGA CCAGCAAGGC GCCGCTTCGA CCATGGACGT TTACCTGGCG
GGCAACTGGC CGGCGCCCTA TGGCATCGTG CTGGCGCTGG ACCGCCTGTC GGCCATGATG
CTGGTGCTGG CCAGCACCAT CGCGCTGGCA TCGAGCGTGT TTGCCGCCGC CCGCTGGCAC
CGTGCGGGCG TTCACTTTCA CCCGCTGTTC CAGCTCCAGC TCATGGGCCT GTGCGGCGCC
TTCCTGACGG CCGACCTGTT CAACCTGTTC GTGTTCTTCG AGATCATGCT GGCCGCCTCC
TACGGGCTGC TGCTGCATGG CTCGGGGCGC GCGCGCGTAC AGTCAGGGCT GCACTTCATT
GCCATCAACC TGGCCGCATC GTCGCTGTTC CTCATCGGCG CGTCGATGCT CTACGGCATC
ACCGGCACGC TGAACATGGC CGACCTGGCG CAAAGCATTC CGATGATCGT CGAGGCCGAC
CGGGGCCTGC TGCATGCCGC CGCCGGCATT TTGGCCACGG CCTTTTTGAT CAAGGCGGCC
ATCTGGCCAC TGAACTTCTG GCTGGTGCCG GCCTACAGCG CGGCGACGGC GCCGGTCGGC
GCGCTGTTCG CCCTCATGAC CAAGGTCGGG ATCTACGTGA TCCTGCGGCT GTGGCTGCTG
CTGTTCGGCA TGGACGCCGG GCCTTCGGCG CAGTTCGGCA GCCTGTGGCT GATAGTCGGC
GGCATGGTGA CGATGGTGTT TGGCGCCATC GGCATGCTCG GCTCGCAGCG CATTGGCTAC
CTGGCCGGTT ATGGCGCCAT CCTGTCGTCG GGCAGCCTGC TGGCCGCCGC CGGGTTTGGC
CAACCCCTGC TGACGGCCGG CCTGCTCTAT TACCTGCCGA GTTCCACGCT GGCCATCAGC
GCCCTCTTCC TGCTGGCCGA CCTGATGGAC CGCTGGCGCA ATGACGGCGC CAGCCAGGCG
CCTTTCGCCG ACGACGAGGC GCCGTTCCTG ACGGCCGAAC TGGTGCCTGC CGTGGGCCTG
AACCTTGACC AGGACGAGGA AGTGCTTACC GGCCAGGTGA TTCCCGCCGC CGTGGCCTTG
CTGGGCCTGG CCTTCATGGC CTGCACCCTG GTGATCACCG GCCTGCCGCC GCTGTCCGGC
TTTGTCGGCA AATTCGCCAT GCTGACGGCC CTGCTCAATC CCTTCGGGCT CGGCCAGCCG
GGCGCGCAGC CTGCGGGCGC GGCGGGCTGG ATGCTCGTGG CGCTGTTGAT CGGCACCGGC
CTGCTGGCGC TGATTGCGCT GACGCGCGCC GGCATCCTGC ATTTCTGGGC GACCTACGAC
CGCGCATTGC CGCAGCTGCG CGTGCTCGAA GGCCTGCCGA TTGCCTTTTT GCTGGGCGCC
TGCCTGCTCC TGACGCTGCA GGCCGGCCCG GTCATGCGCT ACATGCAGGC CACCGCCGAT
GCGCTGCACG CGCCCGGACT TTATGTGCGG GCAGTCATGT CCGCCCGGCC GATACCGGGG
CCGCAGGCGC CACGGATCGA TCCGGCCAAG GAGGCGCCTT GA
|
|---|
| Protein sequence | MSLTSSLNQA MAPLMPHLML APILLPLLTA ALMLLMREDR QRFKLIVNMG STLLGLGVSL
ALLGWADQQG AASTMDVYLA GNWPAPYGIV LALDRLSAMM LVLASTIALA SSVFAAARWH
RAGVHFHPLF QLQLMGLCGA FLTADLFNLF VFFEIMLAAS YGLLLHGSGR ARVQSGLHFI
AINLAASSLF LIGASMLYGI TGTLNMADLA QSIPMIVEAD RGLLHAAAGI LATAFLIKAA
IWPLNFWLVP AYSAATAPVG ALFALMTKVG IYVILRLWLL LFGMDAGPSA QFGSLWLIVG
GMVTMVFGAI GMLGSQRIGY LAGYGAILSS GSLLAAAGFG QPLLTAGLLY YLPSSTLAIS
ALFLLADLMD RWRNDGASQA PFADDEAPFL TAELVPAVGL NLDQDEEVLT GQVIPAAVAL
LGLAFMACTL VITGLPPLSG FVGKFAMLTA LLNPFGLGQP GAQPAGAAGW MLVALLIGTG
LLALIALTRA GILHFWATYD RALPQLRVLE GLPIAFLLGA CLLLTLQAGP VMRYMQATAD
ALHAPGLYVR AVMSARPIPG PQAPRIDPAK EAP
|
|---|
| |