Gene Pnap_1521 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1521 
Symbol 
ID4686677 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1609214 
End bp1609705 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content68% 
IMG OID639834524 
Productputative monovalent cation/H+ antiporter subunit E 
Protein accessionYP_981756 
Protein GI121604427 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1863] Multisubunit Na+/H+ antiporter, MnhE subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00868483 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAAAAAA TCCTGCCCGC GCCGCTGCTG TCGGCGGCGC TGTTCGTGCT GTGGCTGCTG 
CTGAACCGCA CGCTGGGCGC GGGCCATGTG CTGCTGGCGC TGGTCCTGGC GCTGGCAATT
CCCCTGCTGA CCGCCGGACT GCGGCCGGTG CCGGTGCGCA TCCGCAGGCC GGGCCTGGCG
CTGCGCCTGC TGCTCACGGT GGCTGGCGAT TCGGTGCGCT CGAACATCGC CGTGATTGGT
TTGCTGCTCA GGCCGGGCAG CCGGCGCCAT CCGCCCGGTT TTGTGCAGGT GCCGCTGGAC
CTGCGCGACC CGAATGCGCT GGCGGCGCTG GCCCTGATTG TCTGCCTGAC TCCCGGCACC
GCCTGGGCCG AGCTGTCGCT GGACCGCGCC ACCTTGCTGC TGCATGCGCT TGAAGTTGAC
GACGCCAGCG CCATGGCCGC GCAGATCAAG GCGCGTTACG AGCGCCCATT GATGGAGATT
TTTGAGCCAT GA
 
Protein sequence
MKKILPAPLL SAALFVLWLL LNRTLGAGHV LLALVLALAI PLLTAGLRPV PVRIRRPGLA 
LRLLLTVAGD SVRSNIAVIG LLLRPGSRRH PPGFVQVPLD LRDPNALAAL ALIVCLTPGT
AWAELSLDRA TLLLHALEVD DASAMAAQIK ARYERPLMEI FEP