Gene Pnap_1518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1518 
Symbol 
ID4687364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1607645 
End bp1608493 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content67% 
IMG OID639834521 
Producthypothetical protein 
Protein accessionYP_981753 
Protein GI121604424 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00888613 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCGC AGACACCACG ACCGGAAACG GCATTGACCA TGAAACTGAA TCGCTTGCCA 
TCCACGTTCC CAACCAGCCG GAATGCTACT TTTTTAATAG CTGCTTGCGC TTTATGCGCG
TGCGCAACAG CCGCTTTTGG CCAAAATTCC GTGCCGCTGG AGGCTGCCGC TGCGCCCGCC
GCTGCGCACC TGAGCCTTTT CTCCTCGGCC AGCGGCACGG AGCCGCCCGC CCCCTGGCGC
GTGGTGGCCC TGCCCAAGGG CCACAAGCCG CTGACGCGCT TCGACATCAT GCCGCTGGAC
GGGCATCCGG TGCTGCGGGT GCAGACCGAC CACTCCTACG CCAACCTGGT GCATGACCTG
CCGGACTTCG CGCTGGCGCC CGGCATGCAT CTGAACTGGC GCTGGCGCCT GGACCAGCCG
CTGCGCCAGG CCGACCTGCG CCAGCGCGCG GGCGACGACA GCCCTCTCAA GGTCTGCGCG
CTGTTTGACC TGCCCATCGA GCAGCTCGGA TTCGTCGAGC GCAACCTGTT GCGCGTGGCG
CGCTCGGTCA GCGGCCAATA CCTGCCCGCC GCCACGCTGT GCTACGTCTG GGACGCGACG
CTGCCGCCCG GAACGCTGCT GCACAACGCC TTCACCCACC GCATGCGCAT GATCGTGCTG
GACAGCGGCG AGCAGCACCT GGGCCAGTGG GTGGCGCACC GGCAAGACCT AGCGGCGGAT
TTTCAGCGCG CCTTCGGCGA GGAAAGCGCG ACTTTGCCGC CGCTGCACGC CGTGCTGGTC
GGCGCCGATT CGGACAATAC GGCTGACCAT AGCCTGGCTT ATGTCGGGGA TATCACGCTT
TTGCCTTGA
 
Protein sequence
MGAQTPRPET ALTMKLNRLP STFPTSRNAT FLIAACALCA CATAAFGQNS VPLEAAAAPA 
AAHLSLFSSA SGTEPPAPWR VVALPKGHKP LTRFDIMPLD GHPVLRVQTD HSYANLVHDL
PDFALAPGMH LNWRWRLDQP LRQADLRQRA GDDSPLKVCA LFDLPIEQLG FVERNLLRVA
RSVSGQYLPA ATLCYVWDAT LPPGTLLHNA FTHRMRMIVL DSGEQHLGQW VAHRQDLAAD
FQRAFGEESA TLPPLHAVLV GADSDNTADH SLAYVGDITL LP