Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1518 |
Symbol | |
ID | 4687364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | + |
Start bp | 1607645 |
End bp | 1608493 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639834521 |
Product | hypothetical protein |
Protein accession | YP_981753 |
Protein GI | 121604424 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00888613 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGCGC AGACACCACG ACCGGAAACG GCATTGACCA TGAAACTGAA TCGCTTGCCA TCCACGTTCC CAACCAGCCG GAATGCTACT TTTTTAATAG CTGCTTGCGC TTTATGCGCG TGCGCAACAG CCGCTTTTGG CCAAAATTCC GTGCCGCTGG AGGCTGCCGC TGCGCCCGCC GCTGCGCACC TGAGCCTTTT CTCCTCGGCC AGCGGCACGG AGCCGCCCGC CCCCTGGCGC GTGGTGGCCC TGCCCAAGGG CCACAAGCCG CTGACGCGCT TCGACATCAT GCCGCTGGAC GGGCATCCGG TGCTGCGGGT GCAGACCGAC CACTCCTACG CCAACCTGGT GCATGACCTG CCGGACTTCG CGCTGGCGCC CGGCATGCAT CTGAACTGGC GCTGGCGCCT GGACCAGCCG CTGCGCCAGG CCGACCTGCG CCAGCGCGCG GGCGACGACA GCCCTCTCAA GGTCTGCGCG CTGTTTGACC TGCCCATCGA GCAGCTCGGA TTCGTCGAGC GCAACCTGTT GCGCGTGGCG CGCTCGGTCA GCGGCCAATA CCTGCCCGCC GCCACGCTGT GCTACGTCTG GGACGCGACG CTGCCGCCCG GAACGCTGCT GCACAACGCC TTCACCCACC GCATGCGCAT GATCGTGCTG GACAGCGGCG AGCAGCACCT GGGCCAGTGG GTGGCGCACC GGCAAGACCT AGCGGCGGAT TTTCAGCGCG CCTTCGGCGA GGAAAGCGCG ACTTTGCCGC CGCTGCACGC CGTGCTGGTC GGCGCCGATT CGGACAATAC GGCTGACCAT AGCCTGGCTT ATGTCGGGGA TATCACGCTT TTGCCTTGA
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Protein sequence | MGAQTPRPET ALTMKLNRLP STFPTSRNAT FLIAACALCA CATAAFGQNS VPLEAAAAPA AAHLSLFSSA SGTEPPAPWR VVALPKGHKP LTRFDIMPLD GHPVLRVQTD HSYANLVHDL PDFALAPGMH LNWRWRLDQP LRQADLRQRA GDDSPLKVCA LFDLPIEQLG FVERNLLRVA RSVSGQYLPA ATLCYVWDAT LPPGTLLHNA FTHRMRMIVL DSGEQHLGQW VAHRQDLAAD FQRAFGEESA TLPPLHAVLV GADSDNTADH SLAYVGDITL LP
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