| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1491 |
|---|
| Symbol | |
|---|
| ID | 4688103 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | - |
|---|
| Start bp | 1579205 |
|---|
| End bp | 1579858 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639834494 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_981726 |
|---|
| Protein GI | 121604397 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACTT TTGGACTTCC TGAATTCCTG TTCATCCTTG AAGCGGCCAA ATGGACGGTG
GCGCTGTCGC TGATCGCCTT CATCGGCGGC GCGATTGGCG GGCTGCTGGT GGCGCTGGGC
CGCACTTCCG AGAACCGGCT GGCGCAACTG CTCTCTGGCG GCTTCATCCA GATTTTCCAG
GGAACGCCGC TGCTGCTGCA ACTGTTCCTG GTGTTCTTTG GCGCGCCGGT GCTGGGTTTC
GACATCAACC CCTGGATTGC GGCCGGTGTG GCACTCATCT TGAACAGCAG CGCCTTTCTG
GGTGAAATCT GGCGCGGCTG CATCCAGGCG ATTCCCGCCG GCCAGGTCGA GGCGGCGCAT
GCGCTGAGCC TGTCCTACTT CTCGCGCATG CGCTTTGTCA TCCTGCCGCA GGCCTTCAAG
ATTGCGCTGG CGCCCACGGT CGGCTACCTG GTGCAGATCA TCAAGGGCAC CTCGCTGGCG
GCGATCATCG GTTTCACCGA GATCACGCGG GCCGGCCAGA TCATCAACAA CGCCACCTTC
CAGCCGTTGA TCGTGTTCAG CGTGGTGGCG GCGATTTATT TCGCGCTGTG CTGGCCGCTG
TCGCTGATGG CCTCGCGCAT GGAACGCCGG CAAGCCGCCG CGCTGGCACG CTGA
|
|---|
| Protein sequence | MRTFGLPEFL FILEAAKWTV ALSLIAFIGG AIGGLLVALG RTSENRLAQL LSGGFIQIFQ
GTPLLLQLFL VFFGAPVLGF DINPWIAAGV ALILNSSAFL GEIWRGCIQA IPAGQVEAAH
ALSLSYFSRM RFVILPQAFK IALAPTVGYL VQIIKGTSLA AIIGFTEITR AGQIINNATF
QPLIVFSVVA AIYFALCWPL SLMASRMERR QAAALAR
|
|---|
| |