| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1463 |
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| Symbol | trmD |
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| ID | 4688844 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1550737 |
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| End bp | 1551519 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834466 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_981698 |
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| Protein GI | 121604369 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTTG ATGTCATCAC CCTGTTTCCC GAGATTTTTT CACCGTTCCT GACGAGCGGT
GTGACGCGCC GTGCCTACGA ATCCGGCCTG GTCGAGGTCA GGCTCTGGAA TCCGCGCGAT
TTTGCCGATG GCAATTACCG GCGGGTCGAT GACCGTCCCT TTGGCGGCGG ACCGGGCATG
GTCATGCTGG CCGAGCCGCT GACGCTGTGC CTTGAAAGCA TTCGCGCTGA CCGCGCCGCT
TGCGGTGCGC CTGACGCGCC CACCGTTCTT TTTTCCCCGG TTGGCACGGT GCTGAGCCAC
GCCAGCGTCG AGCGCTGGTC AGCCAGCAGC AGCGGCGCCG TGCTGATTTG TGGCCGCTAC
GAAGGCCTTG ACCAGCGTTT TATCGACACG CATGTGGACC ACCAGATCAG CCTGGGCGAC
TTCGTGCTGT CGGGCGGCGA AATCGCCGCC ATGGCCTTGC TGGACGCTGT GGCCCGGTTG
CAGCCTGGAG TGCTAAACGA TGAAGGCAGT CACCAGATGG ACAGCTTCAA CCCGGCGCTT
GACGGCTTGC TGGACTGCCC GCATTACACC CGCCCGGAAA CCTGGCGCGG CCAGTCGGTG
CCGCCCGAAT TGATGTCCGG CAACCATGCG CACATCGAGC GCTGGCGGCG TGAGCAGGGG
CTGGCCTTGA CCCAGCGCCA GCGCCCGGAA CTGGTTCGGG CAGCCCGTAG GGCCGGGCAT
CTGAGCAAAA GCGACGAGGC CTTCCTGGCT GATTTTCCCA AAAATCCTGA CCTCGATTCC
TGA
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| Protein sequence | MRFDVITLFP EIFSPFLTSG VTRRAYESGL VEVRLWNPRD FADGNYRRVD DRPFGGGPGM
VMLAEPLTLC LESIRADRAA CGAPDAPTVL FSPVGTVLSH ASVERWSASS SGAVLICGRY
EGLDQRFIDT HVDHQISLGD FVLSGGEIAA MALLDAVARL QPGVLNDEGS HQMDSFNPAL
DGLLDCPHYT RPETWRGQSV PPELMSGNHA HIERWRREQG LALTQRQRPE LVRAARRAGH
LSKSDEAFLA DFPKNPDLDS
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