Gene Pnap_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1460 
Symbol 
ID4689959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1549027 
End bp1549563 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content65% 
IMG OID639834463 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_981695 
Protein GI121604366 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCA TACGCCCCAG CCGCGACGAA GACATTCGCG CCATCACCGC GATTTACGCC 
CACCATGTGC TGCACGGCAC CGGCACGTTT GAAACCGAGC CGCCCGGAAC CAGCGACATG
GCTGCCCGCC GTGCCGACGT GCAGTCCAAG GGACTGCCCT ACCTGGTTGC CGAGCAGGAC
GGAAAGATTC TGGGCTTTGC CTACGGCAAC TGGTTCAAGC CCCGTCCAGC CTACCGGTAT
TCGGTGGAGG ACTCGATTTA CCTTGCGCCG GACCTGCAGC GCAAGGGCCT GGGCCGCGCC
TTGCTGGCTG AACTGCTGGC GCGCTGCGAG GCGGCGGGGA TTCGCAAGGT CATGGCCATC
GTCGGCGATT CGGCCAACGC CGGGTCGGTG GGGGTTCACC TGGCCCTGGG TTTCAGGCAG
GTCGGCATCA TTGAGTCCTG CGGCTGGAAA TTCGGCGCCT GGCGCGATAT CGTGATCATG
CAAAAGACCC TGGGGCCTGG CGACACGGAG CCGCCGTCAG AACCGTCCGC CTCATAA
 
Protein sequence
MPLIRPSRDE DIRAITAIYA HHVLHGTGTF ETEPPGTSDM AARRADVQSK GLPYLVAEQD 
GKILGFAYGN WFKPRPAYRY SVEDSIYLAP DLQRKGLGRA LLAELLARCE AAGIRKVMAI
VGDSANAGSV GVHLALGFRQ VGIIESCGWK FGAWRDIVIM QKTLGPGDTE PPSEPSAS