| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1454 |
|---|
| Symbol | |
|---|
| ID | 4686765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1544935 |
|---|
| End bp | 1545471 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 639834457 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_981689 |
|---|
| Protein GI | 121604360 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.21997 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAAC GACGCATGCT TCTCTCGGCG GCCATTGCCG CTCCCATCGC TCTGGCGGGC
TGCGCCAGCC AGAGCCTGGC GGACTACGCC GGCGAAAAGC CGATGCTGGA CCTGGCGCAA
TATTTCAATG GCCGCATCGA CGCCCACGGC ATCTTCCAGG GCCGAAACGG CAAGATCGTG
AAGCGCTTTA CCGTGATGAT GGATTGCCAG TGGACGGGCA ACCAGGGCGT GCTCGATGAG
TCCTTCACCT ACTCCGACGG CAGCACGCAG CGCCGCATCT GGCGATTGAC CAAACATGCC
GACGGACGCT ACAGCGGCAC CGCCGGCGAC GTGGTGGGCG AAGCCGTGGG GCAGACCTCG
GGCAATGCCT TTCGCTGGAA CTACACCCTG AAACTGCCGG TGGACGGAAA AGTCTATGAA
GTGCAGTTCG ACGACTGGAT GTACCTGATG GACAAGCACG TCATGATCAA CCGGGCCACC
ATGAGCAAGT TTGGCATTCG CCTGGGCGAA GTCACGCTGT CCTTTACCAA ACGCTGA
|
|---|
| Protein sequence | MMQRRMLLSA AIAAPIALAG CASQSLADYA GEKPMLDLAQ YFNGRIDAHG IFQGRNGKIV
KRFTVMMDCQ WTGNQGVLDE SFTYSDGSTQ RRIWRLTKHA DGRYSGTAGD VVGEAVGQTS
GNAFRWNYTL KLPVDGKVYE VQFDDWMYLM DKHVMINRAT MSKFGIRLGE VTLSFTKR
|
|---|
| |