| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1449 |
|---|
| Symbol | |
|---|
| ID | 4686547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008781 |
|---|
| Strand | + |
|---|
| Start bp | 1539680 |
|---|
| End bp | 1540984 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 639834452 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_981684 |
|---|
| Protein GI | 121604355 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2907] Predicted NAD/FAD-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCG CCATCGTCGG ATCCGGCATC TCCGGCCTGG CCGTGGCCCA CAAGCTGCAG
GGCCAGGCCG ACATCACCCT GTTCGAGGCC GGTGATTATT TCGGTGGCCA CACGCACACG
GTCGATGTCA CGCTGACTAC CCCGCAGGGC AAGCTCACGC ATGGTGTGGA TACCGGCTTT
CTGGTGTTCA ACGAGCGTAC CTACCCACAT CTGATTGCGC TGCTGGCCGA ACTGGACGTG
AGCACGGCAA AGTCGGACAT GTCGTTCTCT GTCCAGGTGC CCGGCGCTCT GCGCGGGCGC
ACGCTGGAGT GGAGCGGCTC CAGCCTGTCC ACCGTCTTCG CCCAGCGCGG CAATCTGGTG
AACCCGCGCT TTCTGGGCAT GCTGGCCGAT CTGCTGCGCT TCAATGCGCT CACCACGCGC
ATTGCACTGG CGAACGACGA ATCGGCCCTG ATGCAGCCGC TGGGCGAGTT CCTGAAGGCG
CACCGCTTTG GCGCCGCCTT TCGCGACTGG TACTTTTTGC CCATGCTGGG CTGCATCTGG
AGCTGCCCCA CGGACCAGAT GCTGAAGTTT CCGGTGGCCA CCATGATCCG TTTCTGCCAC
AACCACGGCC TGATCCAGGT CAGCAACCGG CCCCAGTGGC ACACCGTGGC GGGCGGCGCG
AAGCACTACG TCGAGAAAAT CGTCGCGCGC ATCGCGGACA AGCGCCTGAA CACCCCGGTG
CGCCGCATCG AGCGCGACGC TGCCGGCGTG CGCGTGGTGA CCGATGGTGG CGCCGAGCGC
TTTGACCGGC TGGTGCTGGC CACCCATTCC GACCAGGCGC TGGCCCTGCT GCACCATGCC
ACGCCACAGG AGCGCCATGC GCTGGGCGCC ATCCGCTATC AGCCCAACCG CGCCGTGCTG
CACACCGACG CCTCGGTGCT GCCTGCCAGG CGCAGCGCCT GGGCCGCCTG GAACTACGAG
CGCGCGCAAG ACAATGGGTG CGAGTCAGCC CGCGTCTGCC TGCACTACCT GATCAACCAG
CTCCAGCCTT TGCCCTTCAG CCAGCCGGTT GTGGTGTCGC TGAATCCGCT GCGCGAGATT
GCCGCGCAGC ACGTGATTGG CGAATACGAC TATGAGCACC CCGTGTTCGA CCTGCCTGCC
ATCCTTGCCC AGGAGCAGGT GGCGCAGCTG CAGGGCCAGC ACCGCACCTG GTTTTGCGGC
GCCTGGACGG GCTACGGCTT CCATGAAGAC GGGCTCAAGT CGGGTCTGGC GGTGGCGCAG
CAGCTGCTCG CCGAGACTCA CATGCCGTGG GAGCAGGCCG CATGA
|
|---|
| Protein sequence | MKLAIVGSGI SGLAVAHKLQ GQADITLFEA GDYFGGHTHT VDVTLTTPQG KLTHGVDTGF
LVFNERTYPH LIALLAELDV STAKSDMSFS VQVPGALRGR TLEWSGSSLS TVFAQRGNLV
NPRFLGMLAD LLRFNALTTR IALANDESAL MQPLGEFLKA HRFGAAFRDW YFLPMLGCIW
SCPTDQMLKF PVATMIRFCH NHGLIQVSNR PQWHTVAGGA KHYVEKIVAR IADKRLNTPV
RRIERDAAGV RVVTDGGAER FDRLVLATHS DQALALLHHA TPQERHALGA IRYQPNRAVL
HTDASVLPAR RSAWAAWNYE RAQDNGCESA RVCLHYLINQ LQPLPFSQPV VVSLNPLREI
AAQHVIGEYD YEHPVFDLPA ILAQEQVAQL QGQHRTWFCG AWTGYGFHED GLKSGLAVAQ
QLLAETHMPW EQAA
|
|---|
| |