| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1446 |
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| Symbol | |
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| ID | 4690098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1535629 |
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| End bp | 1537203 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834449 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_981681 |
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| Protein GI | 121604352 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0633713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCCG CACCCACTTC CGCATCTGAC TTTCTTCCGC CGCCGCCGCT GACCGGCTCG
GCCCGCCTGT GGGGCACGCT GGCGCTGTCG GCCGCCACTT TCATGAACGT GCTCGACACC
TCGATTGCCA ATGTGTCGCT GCCGGCCATT GCCGGTGACC TGGGCGTCAG CCCGAACCAG
GGTACCTGGG TGATCACCAG TTTTGGCGTC GCCAACGCGA TTGCCGTGCC GCTGACCGGC
TGGCTGTCGC AGCGCTTTGG CCAGGTCCGG CTGTTCACCG CCAGCATCAT GCTGTTCGTG
CTGACCTCCT GGCTGTGCGG ACTGGCGCCG AACATGACGA CGCTGATCTT TTTGCGCGTC
CTGCAGGGGC TGGTGGCCGG GCCCATGATT CCGCTGTCGC AGGCGCTGCT GCTGTCGAGC
TACCCGAAGG CGCTGGCCGG GCTGGCGATG GCGCTGTGGT CGATGACCAC GCTGGTCGCG
CCGGTCATGG GGCCGCTGCT GGGTGGCTGG ATCACCGACA ACATTTCGTG GCCGTGGATT
TTCTACATCA ACATACCGGT CGGCTTTGGC GCGGCTTTCA TCACCTGGAG CATTTTTCAC
AAGCGCGAAA GCCAGACCCG CAAGCTGCCG ATTGACTCGA TTGGCCTGGC GCTGCTGGTG
ATCTGGGTCG GCGCGCTGCA GATCATGCTC GACAAGGGCA AGGAGCTGGA CTGGTTTCAC
TCCGGCGAGG TGATTGCGCT GGGCATTGTG GCGCTGGTCG GCTTGATTGC CTTTGTGATC
TGGGAGCTGA CCGAAGAGCA TCCGGTGGTG GATTTGAGCT TGTTCAAAAA GCGCAACTTC
TGGGCTGGCG TGCTCGCCCT GTCAGTCGGT TACGGCCTGT TTTTCGGCAA TGTGGTGCTG
TTGCCGCTGT GGCTGCAGCA GTACATGGGC TACACGGCGA CCCAGGCCGG CATGGTGCTG
GCGCCGGTCG GGCTGATGGC CTTGCTGCTC TCGCCGCTGG TCGGCAAGAA CATCGGCAAG
GCCGACCCGC GCCACTTTGC CGCTTTGGCC TTTGCCGTGT TTGCGCTGGT GCTGTGGATG
CGCTCGAACT TCAGCACCCA GGCCGACATG GCGACCATCC TGATTCCGAC GCTGATCCAG
GGCGTGGCCA TGGCCTGCTT TTTCATCCCG CTGATGACCA TCACGCTGTC GGGCCTGTCC
CATGACAAGA TTCCGGCCGC CTCGGGCCTC TCGAACTTTG TGCGCATCAC GGCGGGCTCA
TTCGGCACGT CGATTGCCAC CACCATCTGG CAGGACCGCG CCGCCATGCA CCATGCGCAG
CTCAGCGAAT TCGTCAATCC GGGAAGCGTC GCCGCCAACA GCGCCTTGTC CGGCCTGGCC
AGTGCCGGGC TGACGCCGGA CCAAGCGCTG GGAAGCATCA ATCGCCTGGT GGATCAGCAG
GCCTACATGC TGGCGGCGAA CGACGTGTTT TATGCCTCCG CCCTGATTTT CCTGCTGCTG
ATTCCGCTGG TGTACCTGAC GCGGCCGGCG CAAGCAGGGG CGGGCAGTGC GGATGCGGCG
GCTGGCGCGC ATTGA
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| Protein sequence | MASAPTSASD FLPPPPLTGS ARLWGTLALS AATFMNVLDT SIANVSLPAI AGDLGVSPNQ
GTWVITSFGV ANAIAVPLTG WLSQRFGQVR LFTASIMLFV LTSWLCGLAP NMTTLIFLRV
LQGLVAGPMI PLSQALLLSS YPKALAGLAM ALWSMTTLVA PVMGPLLGGW ITDNISWPWI
FYINIPVGFG AAFITWSIFH KRESQTRKLP IDSIGLALLV IWVGALQIML DKGKELDWFH
SGEVIALGIV ALVGLIAFVI WELTEEHPVV DLSLFKKRNF WAGVLALSVG YGLFFGNVVL
LPLWLQQYMG YTATQAGMVL APVGLMALLL SPLVGKNIGK ADPRHFAALA FAVFALVLWM
RSNFSTQADM ATILIPTLIQ GVAMACFFIP LMTITLSGLS HDKIPAASGL SNFVRITAGS
FGTSIATTIW QDRAAMHHAQ LSEFVNPGSV AANSALSGLA SAGLTPDQAL GSINRLVDQQ
AYMLAANDVF YASALIFLLL IPLVYLTRPA QAGAGSADAA AGAH
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