| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1445 |
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| Symbol | |
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| ID | 4687772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1534247 |
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| End bp | 1535581 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639834448 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_981680 |
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| Protein GI | 121604351 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCAC CCCAAACCTC CGCTTCCCCA GCTTCCGCCG GCCCGGCCGT GCCGGTTCAG
CCGCCGGCCG GCAATCCCAA GCGCAGGAAG GCACTGACTG CGCTCGCCAG CGTCGTCGTG
GTGGCCGGCC TGGGCTGGGC CGCCTACGAA TATTTGGTGG CCAGCCATTA CGAATCCACC
GACAACGCCT ATGTGCAGGG CAACGTGATC CAGATCACGC CGCAAATCGG CGGCACGGTC
ATCGCGCTCA TGGCCGACGA CACCGATTTC GTCAAGGCCG GCCAGCCGCT GGTGCAGCTC
GACCCGGCCG ATGCGAAAGT GGCGCTCGAC CAGGCCGAGG CTGGCCTGGC CCAGGCGGTG
CGCCAGGCGC GCACGCTGTA CGCCAACAAT GGCTCGCTGG CCGCGCAGAT CGCGCTGCGC
GATGCCGATG TGAGCAAGGC CAACAGCGAG ATTGCACGCG CCGCCGACGA CCTCAAGCGC
CGCGAGTCGC TCACCGGCAA CGGCGCGGTT TCCAGGGAAG AACTCAACCA CGCGCAGACG
CAGCTGGCCA ACGCCAAAAG CGCGCTGGCG GCCGCACAGG CCGGCGTCAT CGCCGCGCGC
GAGCAGCTCG GCAGCAACCA GGCGCTGACC GAGGGCACCA GCATCGAGCA GCACCCGAGC
GTGCAGGTCG CCGCCGCCAA GGTGCGCGAA GCTTTCCTGG CCTCCCAGCG CACGGCCTTG
ACAGCGCCGG TCGATGGCTA TGTCGCCAAG CGCACCGTGC AGCTCGGCCA GCGCGTGGCC
GCCGGCACGC CGCTGATGTC GGTGATTCCG CTGAACCAGG TCTGGGTCGA TGCCAACTTC
AAGGAAGTGC AGCTGCGCAA TATCCGCATC GGCCAGCCGG TGACGCTGGT GGCCGACCTG
TACGGCAAGA AGGTCGATTA CCAGGGCACG GTCGCCGGCC TGGGCGTGGG CACCGGCGCG
GCCTTTTCGC TGCTGCCGGC GCAAAACGCC ACCGGCAACT GGATCAAGGT GGTCCAGCGC
GTGCCGGTGC GCATTGCGCT GGAGCCAAAG CAGCTTGCGG AACACCCGCT GCGGGTCGGC
CTGTCGATGG ATGCCGAAGT CGATGTGAGC AAGCAGGACG GCAAGACCCT GGCCGATGCG
CCGCGCGATG CCGCGCAGGC GCACACGCAG GCCTTTGCCT CGCAGGACGA CGCTGCCAGC
GAGGACGTGA GCCGCGTGAT TGCCGCGAAT GCCGGCAAGG GCTTCAAGGC GGCAAAGAGC
AGCCCGGTGG TGAAGGCTGA TGCCGTGGCG CTGGCCCTGC GGTCTGCGGA CGGTGGCGCC
GGGCCGCAGC ACTGA
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| Protein sequence | MNAPQTSASP ASAGPAVPVQ PPAGNPKRRK ALTALASVVV VAGLGWAAYE YLVASHYEST
DNAYVQGNVI QITPQIGGTV IALMADDTDF VKAGQPLVQL DPADAKVALD QAEAGLAQAV
RQARTLYANN GSLAAQIALR DADVSKANSE IARAADDLKR RESLTGNGAV SREELNHAQT
QLANAKSALA AAQAGVIAAR EQLGSNQALT EGTSIEQHPS VQVAAAKVRE AFLASQRTAL
TAPVDGYVAK RTVQLGQRVA AGTPLMSVIP LNQVWVDANF KEVQLRNIRI GQPVTLVADL
YGKKVDYQGT VAGLGVGTGA AFSLLPAQNA TGNWIKVVQR VPVRIALEPK QLAEHPLRVG
LSMDAEVDVS KQDGKTLADA PRDAAQAHTQ AFASQDDAAS EDVSRVIAAN AGKGFKAAKS
SPVVKADAVA LALRSADGGA GPQH
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