Gene Pnap_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1425 
Symbol 
ID4687908 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1513058 
End bp1513537 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content54% 
IMG OID639834428 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_981660 
Protein GI121604331 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.301169 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCTTG AAGGTGTTTT CAAAGAAGGC TTCGTGACCA CGAGCTACGA CTCGGTGGTT 
AATTGGGCCA AGACAGGTTC GCTTTGGCCT ATGACTTTTG GTCTGGCCTG CTGCGCTGTG
GAAATGATGC ATGCCGGTGC TGCACGCTAC GACATCGACC GTTTTGGCAT GCTGTTTCGT
CCCAGTCCGC GTCAATCTGA TTTAATGATT GTTGCTGGTA CGCTGTGCAA TAAGATGGGG
CCTGCCCTGC GCAAGGTTTA CGACCAGATG GCTGAGCCTC GCTGGGTTAT ATCCATGGGT
TCGTGCGCCA ATGGCGGTGG TTACTACCAC TACAGTTATT CCGTGGTTCG TGGTTGCGAC
CGTATCGTGC CGGTGGATGT TTATGTACCG GGCTGTCCGC CCACCGCCGA AGCCTTGTTG
TACGGCATCA TCCAGTTGCA GCAAAAAATC CGCCGAACCA ATACGATTGC GAGGGCTTGA
 
Protein sequence
MSLEGVFKEG FVTTSYDSVV NWAKTGSLWP MTFGLACCAV EMMHAGAARY DIDRFGMLFR 
PSPRQSDLMI VAGTLCNKMG PALRKVYDQM AEPRWVISMG SCANGGGYYH YSYSVVRGCD
RIVPVDVYVP GCPPTAEALL YGIIQLQQKI RRTNTIARA