| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1417 |
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| Symbol | |
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| ID | 4687524 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1504783 |
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| End bp | 1506048 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639834419 |
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| Product | putative transporter signal peptide protein |
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| Protein accession | YP_981652 |
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| Protein GI | 121604323 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.752451 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACAC TTTTCAAACG CACTGCCGCA GTTCTTGGCC TGGGTTTCTC GCTGCTCGCC
CAGGCTCAGC CCGCGCCCCA GCCGCCGGTG CGCATCGCCC TGATCGAAAG CCTCTCGGGC
GCGTTTGCCA ACACCGGAGA AGCCGTGTTT CGCAACCTGG TGTGGGCCAC CGAGCGCGTC
AATGCGCGCG GCGGCGTCAA GCTGGCCGAC GGCCAGCACA ACCTGGCCAT CGAGCGCTAT
GACAACAAGG GCCAGAACGA GGAAGCGCTG GCCGCCTTGC GCTCGGCGAT TGATGACGGC
GTGACCGTGA TTGCGCAGGG CAATTCGTCG TCGGTCGCGG CGGCGCTGAT CGACGCCATC
AACAAGCACA ACGAACGCGA GCCCGGCAAG CGGGTGCTGT TGCTGAATTA TTCGGCGGTT
GATCCCATCC TGACGAACGA GAAATGCAGC TACTGGCATT TCCGCTTCGA CGCCCATGCC
GACATGCGCA TGGCCGCGCT GATGGACGTG TTCAAGGACG ACGCGGCGCT CAAGAAGGTG
TACCTGATCG GCCAGGACTA CAGCTTCGGC CAGGCGGTGC TGCGCGAAGG GCGCAAGCAG
ATCGCCGCGC AGCGACCCGA TGTCCAGATC GTCGGCGACG AGCTGCATCC TATCGGGCGC
GTCAAGGATT TCATTCCCTA TGCGGTCAAG ATCAAGTCCA GCGGCGCCCA GGCGGTGCTG
ACCGGCAACT GGGGCAACGA CCTGACGCTG CTCATCAAGG CGGCGAGGGA GGTGGGCTAT
GACGGCAAGT TCTACACCTT CTACGGCAAT GCGCTGGGCG TGCCCGCCGC GCTCGGCGAT
GCCGGGGTCG GCAAGGTGAT TGCCGTGGCC GACTGGTTTC CCAACACGCC GGGTGCCGCG
TCCGAGAATT TCTACCAGTC CTTTCGCCAG CGCTTTCCCC GGCCGCAGGA CGACTACGTT
CACATGCGCA TGCAGCTGAT GGTGGAAACG CTGGCCCAGA GCCTGGAAAA AGCCGGCGTG
GTTGAAGCGG GCGCCGTCGC CGCGCAAATG GAAAAAGCCA CGGTGAATTT CTCAGGCGTC
AAGGGCAGCA TGCGCGCTAG CGACCACCAG TTCCAGCAGC CGCTGGCGGT GGCGGTGATG
GACAAGCAAG GCGCGCCGGG CGCGAAGTTC GATGTCGAAG GTTCGGGTTA CGGTTTTCGC
GTTATCAAGG CCATTTCGGC GCAGCGTGCC GAGCAGCCGA CAAGCTGCAA GATGGTGCGT
CATTAA
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| Protein sequence | MRTLFKRTAA VLGLGFSLLA QAQPAPQPPV RIALIESLSG AFANTGEAVF RNLVWATERV
NARGGVKLAD GQHNLAIERY DNKGQNEEAL AALRSAIDDG VTVIAQGNSS SVAAALIDAI
NKHNEREPGK RVLLLNYSAV DPILTNEKCS YWHFRFDAHA DMRMAALMDV FKDDAALKKV
YLIGQDYSFG QAVLREGRKQ IAAQRPDVQI VGDELHPIGR VKDFIPYAVK IKSSGAQAVL
TGNWGNDLTL LIKAAREVGY DGKFYTFYGN ALGVPAALGD AGVGKVIAVA DWFPNTPGAA
SENFYQSFRQ RFPRPQDDYV HMRMQLMVET LAQSLEKAGV VEAGAVAAQM EKATVNFSGV
KGSMRASDHQ FQQPLAVAVM DKQGAPGAKF DVEGSGYGFR VIKAISAQRA EQPTSCKMVR
H
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