Gene Pnap_1398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1398 
Symbol 
ID4687759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1483192 
End bp1484097 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content58% 
IMG OID639834400 
Producthypothetical protein 
Protein accessionYP_981633 
Protein GI121604304 
COG category[K] Transcription 
COG ID[COG2378] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.960622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.269111 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAAC GCCCGGATAC ACTGGAAACC CTCCGGCTTT CCCTTGAGTT GCTGCACCGC 
ATTCCTAGGC GCGGCACGGT TACGGCAAAC GAATTGCGCC TGCAACTGCG CGAAGCCGGT
TTCGAGCGGG AGCCACGAAC CATCCAGCGC CTGCTGCAAA CGCTAACCGA ATTCAGCGGC
ATCGAATGCA ATAACAGCAG CAAGCCCTAC CGTTATTGCT GGAAAGAGGG CGCCCGAAGT
TTCTCCATGC AAGGGCTGAG CCCACAGGAA TCCCTGCTGC TCACGCTGGC CGAGCAGCAA
CTGGGCAGCC TGCTGCCGGC TCGGCTGATG AAATCCATGA ATAACTTTTT CAGCCAGGCG
CGCAGCCAGC TGGGAGACAA AGGCACGCCT CAGCGCGAGC GCGAATGGCT GGACAAAGTG
CGCGTGGTCA GCACCAGCCA GCCGCTGCTG CCACCCAAAA TTAATCCCGA AGTCTTCGAG
CAGGTCAGCA ATGCACTGTA TGGCGACCAA TGGCTGGAGG TGGATTATCA AAATGCCGAG
GGTAATAGAA AAACCTCCAA GGTCATGCCG CTGGGTCTGG CGCAGCAGGG GCCGCGCATG
TACCTGGTTT GCCGATTCGA TGGCTATGAC AACGAACGCT GCCTGGCGCT GCACCGCTTT
ATATCGGCCA AAGCGTCAAC GCTGACGTTT GAGCGCCCCA AGGATTTCAA CCTCAAGCAG
TTTGATGACG ATGGACGCTT TGGTTATGGC GATGGCACGA AAATCCGCCT GAGTTTCCGG
ATTGAGAAAG GAGCCGGGCT GCACATCGTC GAATGCCCGC TGTCTACCAA TCAGCAGGTG
GTGGAACTGG AGGATGCTTA TGAGATTACG GCGACGGTGG TGGAGTCGGA TATGCTGGAC
TGGTGA
 
Protein sequence
MAKRPDTLET LRLSLELLHR IPRRGTVTAN ELRLQLREAG FEREPRTIQR LLQTLTEFSG 
IECNNSSKPY RYCWKEGARS FSMQGLSPQE SLLLTLAEQQ LGSLLPARLM KSMNNFFSQA
RSQLGDKGTP QREREWLDKV RVVSTSQPLL PPKINPEVFE QVSNALYGDQ WLEVDYQNAE
GNRKTSKVMP LGLAQQGPRM YLVCRFDGYD NERCLALHRF ISAKASTLTF ERPKDFNLKQ
FDDDGRFGYG DGTKIRLSFR IEKGAGLHIV ECPLSTNQQV VELEDAYEIT ATVVESDMLD
W