Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1398 |
Symbol | |
ID | 4687759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1483192 |
End bp | 1484097 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639834400 |
Product | hypothetical protein |
Protein accession | YP_981633 |
Protein GI | 121604304 |
COG category | [K] Transcription |
COG ID | [COG2378] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.960622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.269111 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAC GCCCGGATAC ACTGGAAACC CTCCGGCTTT CCCTTGAGTT GCTGCACCGC ATTCCTAGGC GCGGCACGGT TACGGCAAAC GAATTGCGCC TGCAACTGCG CGAAGCCGGT TTCGAGCGGG AGCCACGAAC CATCCAGCGC CTGCTGCAAA CGCTAACCGA ATTCAGCGGC ATCGAATGCA ATAACAGCAG CAAGCCCTAC CGTTATTGCT GGAAAGAGGG CGCCCGAAGT TTCTCCATGC AAGGGCTGAG CCCACAGGAA TCCCTGCTGC TCACGCTGGC CGAGCAGCAA CTGGGCAGCC TGCTGCCGGC TCGGCTGATG AAATCCATGA ATAACTTTTT CAGCCAGGCG CGCAGCCAGC TGGGAGACAA AGGCACGCCT CAGCGCGAGC GCGAATGGCT GGACAAAGTG CGCGTGGTCA GCACCAGCCA GCCGCTGCTG CCACCCAAAA TTAATCCCGA AGTCTTCGAG CAGGTCAGCA ATGCACTGTA TGGCGACCAA TGGCTGGAGG TGGATTATCA AAATGCCGAG GGTAATAGAA AAACCTCCAA GGTCATGCCG CTGGGTCTGG CGCAGCAGGG GCCGCGCATG TACCTGGTTT GCCGATTCGA TGGCTATGAC AACGAACGCT GCCTGGCGCT GCACCGCTTT ATATCGGCCA AAGCGTCAAC GCTGACGTTT GAGCGCCCCA AGGATTTCAA CCTCAAGCAG TTTGATGACG ATGGACGCTT TGGTTATGGC GATGGCACGA AAATCCGCCT GAGTTTCCGG ATTGAGAAAG GAGCCGGGCT GCACATCGTC GAATGCCCGC TGTCTACCAA TCAGCAGGTG GTGGAACTGG AGGATGCTTA TGAGATTACG GCGACGGTGG TGGAGTCGGA TATGCTGGAC TGGTGA
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Protein sequence | MAKRPDTLET LRLSLELLHR IPRRGTVTAN ELRLQLREAG FEREPRTIQR LLQTLTEFSG IECNNSSKPY RYCWKEGARS FSMQGLSPQE SLLLTLAEQQ LGSLLPARLM KSMNNFFSQA RSQLGDKGTP QREREWLDKV RVVSTSQPLL PPKINPEVFE QVSNALYGDQ WLEVDYQNAE GNRKTSKVMP LGLAQQGPRM YLVCRFDGYD NERCLALHRF ISAKASTLTF ERPKDFNLKQ FDDDGRFGYG DGTKIRLSFR IEKGAGLHIV ECPLSTNQQV VELEDAYEIT ATVVESDMLD W
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