| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1388 |
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| Symbol | rpsU |
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| ID | 4689300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | - |
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| Start bp | 1475926 |
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| End bp | 1476138 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639834390 |
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| Product | 30S ribosomal protein S21 |
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| Protein accession | YP_981623 |
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| Protein GI | 121604294 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0828] Ribosomal protein S21 |
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| TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000560613 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0166741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCACCA TTCGCGTAAA AGACAACGAA CCCTTTGACG TCGCTCTGCG CCGCTTCAAG
CGAACCATCG AAAAACTCGG CCTGCTGACC GACTTGCGTG CGCGTGAGTT CTACGAAAAG
CCAACCGCCG AGCGCAAGCG CAAGAAGGCA GCCGCCGTCA AGCGCAACTA CAAGCGCATT
CGCGCCATGC AGTTGCCCAA GAAGCTGTAC TGA
|
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| Protein sequence | MTTIRVKDNE PFDVALRRFK RTIEKLGLLT DLRAREFYEK PTAERKRKKA AAVKRNYKRI
RAMQLPKKLY
|
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