Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1388 |
Symbol | rpsU |
ID | 4689300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1475926 |
End bp | 1476138 |
Gene Length | 213 bp |
Protein Length | 70 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639834390 |
Product | 30S ribosomal protein S21 |
Protein accession | YP_981623 |
Protein GI | 121604294 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0828] Ribosomal protein S21 |
TIGRFAM ID | [TIGR00030] ribosomal protein S21 |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000560613 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0166741 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCA TTCGCGTAAA AGACAACGAA CCCTTTGACG TCGCTCTGCG CCGCTTCAAG CGAACCATCG AAAAACTCGG CCTGCTGACC GACTTGCGTG CGCGTGAGTT CTACGAAAAG CCAACCGCCG AGCGCAAGCG CAAGAAGGCA GCCGCCGTCA AGCGCAACTA CAAGCGCATT CGCGCCATGC AGTTGCCCAA GAAGCTGTAC TGA
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Protein sequence | MTTIRVKDNE PFDVALRRFK RTIEKLGLLT DLRAREFYEK PTAERKRKKA AAVKRNYKRI RAMQLPKKLY
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