Gene Pnap_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1387 
Symbol 
ID4688611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1475342 
End bp1475803 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content63% 
IMG OID639834389 
ProductGatB/Yqey domain-containing protein 
Protein accessionYP_981622 
Protein GI121604293 
COG category[S] Function unknown 
COG ID[COG1610] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000956621 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00945074 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCTCA AAGAACAAAT CACCGAAGAC ATGAAAACCG CCATGCGCGC CAAGGACAGC 
GAGCGCCTGG GCACCATCCG CCTGCTGCTG TCGGCCATCA AGCAAAAGGA AGTGGACGAG
CGCGTGGTGG TGGACGACGT GATGGCTGTG GCCATCGTGG ACAAGCTGAT CAAGCAGCGC
AAGGATTCGA TTGAGGCGTT TGAAAAAGCC GAGCGCAAGG ATCTGGCCGA CAAGGAAGCG
GCCGAACTGC TGGTGCTGCA AGCCTACCTG CCGGCCCGCC TGAGCCTTGA TGAGGTCACC
ACCGAAGTCA AGGCCATCGT CGCCACGCTG GCCGCCGAGA TGGGCCGCGC CGTGGGTCCG
GCCGACATGG GCAAGGTCAT GGGCGCGGTG AAGGCCCAGC TGGCCGGCAA GGCCGACATG
GGCCAGGTGT CGGCGGCGGT GAAGGCTGCG CTGGCTTCTT AA
 
Protein sequence
MTLKEQITED MKTAMRAKDS ERLGTIRLLL SAIKQKEVDE RVVVDDVMAV AIVDKLIKQR 
KDSIEAFEKA ERKDLADKEA AELLVLQAYL PARLSLDEVT TEVKAIVATL AAEMGRAVGP
ADMGKVMGAV KAQLAGKADM GQVSAAVKAA LAS