Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1387 |
Symbol | |
ID | 4688611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1475342 |
End bp | 1475803 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 639834389 |
Product | GatB/Yqey domain-containing protein |
Protein accession | YP_981622 |
Protein GI | 121604293 |
COG category | [S] Function unknown |
COG ID | [COG1610] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000956621 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00945074 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCTCA AAGAACAAAT CACCGAAGAC ATGAAAACCG CCATGCGCGC CAAGGACAGC GAGCGCCTGG GCACCATCCG CCTGCTGCTG TCGGCCATCA AGCAAAAGGA AGTGGACGAG CGCGTGGTGG TGGACGACGT GATGGCTGTG GCCATCGTGG ACAAGCTGAT CAAGCAGCGC AAGGATTCGA TTGAGGCGTT TGAAAAAGCC GAGCGCAAGG ATCTGGCCGA CAAGGAAGCG GCCGAACTGC TGGTGCTGCA AGCCTACCTG CCGGCCCGCC TGAGCCTTGA TGAGGTCACC ACCGAAGTCA AGGCCATCGT CGCCACGCTG GCCGCCGAGA TGGGCCGCGC CGTGGGTCCG GCCGACATGG GCAAGGTCAT GGGCGCGGTG AAGGCCCAGC TGGCCGGCAA GGCCGACATG GGCCAGGTGT CGGCGGCGGT GAAGGCTGCG CTGGCTTCTT AA
|
Protein sequence | MTLKEQITED MKTAMRAKDS ERLGTIRLLL SAIKQKEVDE RVVVDDVMAV AIVDKLIKQR KDSIEAFEKA ERKDLADKEA AELLVLQAYL PARLSLDEVT TEVKAIVATL AAEMGRAVGP ADMGKVMGAV KAQLAGKADM GQVSAAVKAA LAS
|
| |