| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1385 |
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| Symbol | |
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| ID | 4686150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1473043 |
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| End bp | 1474452 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834387 |
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| Product | peptidase U62, modulator of DNA gyrase |
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| Protein accession | YP_981620 |
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| Protein GI | 121604291 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000808939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0131442 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA AATCACCTGT CCGTTCATCC CGCACCGCTT CCCGCGTTAA AACCACCCAG
CCCGAGGCCG GTTTCAGCTA CCACCGCGAC TTTTTTGAAG ACCTGGTCGA TACCGCACTT
AGCCATGCCA AGAAGCTGGG CGCGACCGAT GCGGCCGCCG AAGCTTCAGA AGGCTGCGGC
CTGTCGGTCA GCGTGCGCAA GGGCGAGCTG GAGTCGGTCG AGCGCAACCG CGACAAGTCG
CTCGGCGTCA CGGTCTATGT CGGCAAAAAG CGCGGCAATG CATCGACCAG CGATTTTTCC
AAGGCCGCCA TCCAGCAGAC CGTGAAGGCG GCTTATGACA TCGCCAGCTT CACGGCCGAA
GACGAAACCT CGGGCCTGCC GGACGAGCAG GACATTGCCC GCGAACACCC GGCGCTGGAC
CTGTTTCATC CGTGGGCCAT CACCTCGGAG CAAGCCGCCC AGCTGGCGCT GCAATGCGAG
GCCGCCGCCA TGGGCACCAG CCGCCTGATC ACCAACAGCG AAGGGGCGGG CGTGTCGGCC
CAGCAAAGCC ATTTTTTCAG CGCCCACACC TCAGGCTTCC GGGGCGGCTA TGCCAGTTCG
CGGCACAGCA TTTCGGTGGC GCCGATTGCC GGCAAGGGCA AGCAGATGCA GCGCGACGCC
TGGTACAGCT CGATGCGCGA CGCGAATGAA CTGGCCCACC CCGAGGCGGT CGGCCGCTAT
GCCGCCGAAC GCGCGCTGGC CCGCCTGAAA GGCCGGAAAA TCCCGACCGT CGAGTGTCCG
GTGCTGTTTG AATCACCCCT GGCCGCCGGC CTGCTGGGCG GTTTTGTGCA GGCCGTCAGC
GGCGGCGCGC TGTACCGCAA AAGCACCTTC CTGGCGAACA GCCTGGGCAA GCTGGCCTTC
CCGAAACACA TCGACATCAA CGAAGACCCG CACCTGCTCA AGGGCAAGGG CAGCGCGCCG
TTCGATGAAG AGGGCGTCAA GACCAGTGCC CGCCAGGTGG TGGAGGCCGG ACGCGTCGCC
GGCTATTTCC TGAGCACCTA TTCAGCGCGC AAGCTCGGCA TGCGGACCAC CGGCAATGCC
GGCGGCTCGC ACAACCTGAC GCTCACCAGC CGCAAGACGA AGGCCGGCGA TGACCTCGAT
GCCATGCTGC GCAAGTTGGG CCGGGGGCTG TTCGTGACCG AACTGATGGG GCAGGGCGTG
AACTACGTGA CCGGCGACTA TTCGCGCGGC GCTTCGGGTT TCTGGGTCGA GAACGGCGAA
ATCGCCTTTC CGGTGGAGGA AATCACGATT GCCGGCAACC TCAAGGACAT GCTGCTGGGC
ATCCAGGCCG TCGGCGCCGA CACCTACAAC TACGGCGCCA AAACCGTGGG CTCGATCCTG
GTCAACCGGA TGAAGGTGGC CGGGTCTTGA
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| Protein sequence | MTQKSPVRSS RTASRVKTTQ PEAGFSYHRD FFEDLVDTAL SHAKKLGATD AAAEASEGCG
LSVSVRKGEL ESVERNRDKS LGVTVYVGKK RGNASTSDFS KAAIQQTVKA AYDIASFTAE
DETSGLPDEQ DIAREHPALD LFHPWAITSE QAAQLALQCE AAAMGTSRLI TNSEGAGVSA
QQSHFFSAHT SGFRGGYASS RHSISVAPIA GKGKQMQRDA WYSSMRDANE LAHPEAVGRY
AAERALARLK GRKIPTVECP VLFESPLAAG LLGGFVQAVS GGALYRKSTF LANSLGKLAF
PKHIDINEDP HLLKGKGSAP FDEEGVKTSA RQVVEAGRVA GYFLSTYSAR KLGMRTTGNA
GGSHNLTLTS RKTKAGDDLD AMLRKLGRGL FVTELMGQGV NYVTGDYSRG ASGFWVENGE
IAFPVEEITI AGNLKDMLLG IQAVGADTYN YGAKTVGSIL VNRMKVAGS
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