Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnap_1384 |
Symbol | |
ID | 4689234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas naphthalenivorans CJ2 |
Kingdom | Bacteria |
Replicon accession | NC_008781 |
Strand | - |
Start bp | 1472428 |
End bp | 1473036 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639834386 |
Product | hypothetical protein |
Protein accession | YP_981619 |
Protein GI | 121604290 |
COG category | [S] Function unknown |
COG ID | [COG3028] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00400035 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0106764 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACTAA GCCCTATGAA CATCAAGACA CCCAAGGCCA TCAAAGGCTA CTGGTCCAAC GGCCGGTTTG TGAAACCCGA AGAAATTGCC CTCGAAGAAG TAGGGCCGCC CAGCAAGACC CAGCTCAAGG CCGAGGCCGG CGAAAAGCAG GCGCTCGGCG AAGCGCTGCT GACCCTGCGC GCCGACCTGA TGGCGCGCCT GGACCTGCCC GAAAAGCTGC TCGACGCGCT GGCGCAGGCC AAGCGCATCA CCAATTTCGA AGGCCGGCGC CGCCAGATGC AATTCATCGG CAAGCTGATG CGGCCGCTGG ACATGACACC GATCCGCGCG GCCATCGACG AGCAGGCAAA CGGCTCGGCC GACCTGACGC TGGCCCTGCA CCTGGCCGAG CAGTGGCGCG ACAAGCTGAT TGCCTCGGAC GACGCGCTCA GCCAGTGGCT CACCGACTAC CCGGCGACTG ATTCGCAGCA GTTGCGTGCG CTGATCCGCC AGGCCCGCAA GGACATTGCC AAGCCCGAAA TACCGGGCGA GGCGCCGCGC CACGGCAAGG CCTACCGCGA GATTTTCCAG CTGGTCAAGC TGGCCATGGC GCAGGAGCCC GAGGCATGA
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Protein sequence | MILSPMNIKT PKAIKGYWSN GRFVKPEEIA LEEVGPPSKT QLKAEAGEKQ ALGEALLTLR ADLMARLDLP EKLLDALAQA KRITNFEGRR RQMQFIGKLM RPLDMTPIRA AIDEQANGSA DLTLALHLAE QWRDKLIASD DALSQWLTDY PATDSQQLRA LIRQARKDIA KPEIPGEAPR HGKAYREIFQ LVKLAMAQEP EA
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