| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_1381 |
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| Symbol | |
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| ID | 4686185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas naphthalenivorans CJ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008781 |
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| Strand | + |
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| Start bp | 1470027 |
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| End bp | 1470962 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639834383 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_981616 |
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| Protein GI | 121604287 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0754104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0118595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGGGGA GGCGACAATA TCGGATTTTA CCGGCTTCGC CCGTCCCGGC CGCAATTACC
TTGAGCGCCA GGGTTTTCGG CTGCGGCGCT GGACCCCTTT TTATTCCCAT GAAAACCCGC
TTCATCCTGA TCAACACCAG CCACGCCGGC AATGTGGGCG CCACCGCCCG CGCCATGAAA
ACCATGGGCT TCGACGACCT GGTGCTGGTC GCGCCGCGCT GGGCCAATGT GCTGCGGCGC
GAGGAAACCA TCCAGCGGGC CAGCGGCGCG CTCGACGTTT TGAACAATGC GCGGATTGTC
GAGACGCTCG ACGAGGCGCT CGACGGCATG GCGCATCTGT GCGCCACGGC CATGACGCCG
CGCGATTTTG GCCCGCCGAC GCGGGCGCCG CGCGCGCATT TCGCCGAGTT GCTGGGGCGA
AGCGAGGCGC TATTAAAACA GGAGCTGGGT ACGCCCGTCC ATCCTGCGCA AAGGCCCGAT
TCGGTTGCTT TTTTGTTCGG CTCCGAGCGC TTTGGCATGC AGAACGAGGA TGTCTATCGC
TGCCATGTCG CCCTGAGCAT TCCGACCGAC CCGAAGTTCG GCTCGCTCAA CCTGGGCGCG
GCGGTGCAGC TGATTGCCTA CGACTGGCGC GAAGCCCTGG GCGGCTTCGG CATTCAGGCG
GCGATTGAAG AACCCCGTCT GGCCGACGCC GCCGCCGTGA GCGGCATGCT CAAGCACTGG
GAAGAAGCGC TTGTCGATAT CGGCTTTCTC GACCCGGCAT CGCCCAAGAA GCTCATGCCG
CGCCTGAACC AGCTGTTCAA CCGCGCGCAG CTCAGCCCCG AGGAAATCCA CATCCTGCGC
GGCGTGGCCA AGGCCATGAT GCGGCATGCG CCCGATAAAG CCTTGCCGGC GGCGGACAAG
CCGCCCGCGC CAGCGGATAC GCCGACCAGC GCCTAA
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| Protein sequence | MAGRRQYRIL PASPVPAAIT LSARVFGCGA GPLFIPMKTR FILINTSHAG NVGATARAMK
TMGFDDLVLV APRWANVLRR EETIQRASGA LDVLNNARIV ETLDEALDGM AHLCATAMTP
RDFGPPTRAP RAHFAELLGR SEALLKQELG TPVHPAQRPD SVAFLFGSER FGMQNEDVYR
CHVALSIPTD PKFGSLNLGA AVQLIAYDWR EALGGFGIQA AIEEPRLADA AAVSGMLKHW
EEALVDIGFL DPASPKKLMP RLNQLFNRAQ LSPEEIHILR GVAKAMMRHA PDKALPAADK
PPAPADTPTS A
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