Gene Pnap_1380 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_1380 
Symbol 
ID4689485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp1468973 
End bp1469965 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content65% 
IMG OID639834382 
Productinositol-phosphate phosphatase 
Protein accessionYP_981615 
Protein GI121604286 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0483] Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.135454 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00587687 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCAGCA ATCTACATCC CATGCTCAAT GTGGCCGTCA AGGCTGCGCG CGCCGCCGGC 
GCCCTCATCA ACCGCGCCGC ACTTGACGTT GAAGCAGTTC GCGTTTCGCT CAAGCAGACC
AACGATTTCG TCACCGAAGT CGATCAGGCC GCCGAAGCCG CGATCATCGA AACCCTGCTG
ACGGCCTACC CCGGCCACGG CATCCTGGCC GAGGAATCGG GCAGCGAGCA TGGCGCGAAG
GACTCCGAAT TCGTCTGGAT CATCGACCCG CTGGACGGCA CCACCAACTT CATCCACGGC
TTTCCGTTTT ACTGCGTCAG CATCGCGCTG TCGGTGCGCG GCAAGATCGA GCAGGCGGTG
GTCTATGACC CGACCCGCAA CGATATCTAC AGCGCCAGCA AGGGCCGGGG CGCCTACGTC
AACGACCGCC GCATCCGCGT GGGCAAGCGC ACCCGCCTGC AGGAATGCCT GATTTCGACC
GGCTTTCCCT ACCGCCCCGG CGACAAGCTC AAGCCCTACC TGAACATGCT CGGCGAAGTC
ATGAGCCAGT GCGCCGGCGT GCGCCGCCCG GGCGCGGCGG CGCTGGACCT GGCGCACGTC
GCGGCCGGCT TCACCGACGG CTTTTTTGAA ACCGGCCTGC TGCCCTGGGA CGTGGCGGCG
GGTTCGCTCC TGATCACCGA AGCGGGCGGG CTGATCGGCA ACTTCACCGG CGAGGCCGAC
TTCATCGACC ACGGCGAATG CGTTGCCGGC AACCCGCGCA TCTACGGCCA GCTGGTCGGT
ACGCTGGGCA AGTACAGCAA GTTTGCCGGC GCCGGCGACA AGGCCACGGT GCGCCAGGCC
CTGCAGGATT CAAGGACTGA AGCCAGCGCG GACGAAAGCA CCGACGGCAG CGAAACAACC
AGCCCCGCCG TGAGTGAAAA ACCCACGCTC AAAGCCAAAA GAATCAGGCC CCCGGTGGCC
CCCGATACCA TCACGCCTGA CGCGCCCTTC TAG
 
Protein sequence
MSSNLHPMLN VAVKAARAAG ALINRAALDV EAVRVSLKQT NDFVTEVDQA AEAAIIETLL 
TAYPGHGILA EESGSEHGAK DSEFVWIIDP LDGTTNFIHG FPFYCVSIAL SVRGKIEQAV
VYDPTRNDIY SASKGRGAYV NDRRIRVGKR TRLQECLIST GFPYRPGDKL KPYLNMLGEV
MSQCAGVRRP GAAALDLAHV AAGFTDGFFE TGLLPWDVAA GSLLITEAGG LIGNFTGEAD
FIDHGECVAG NPRIYGQLVG TLGKYSKFAG AGDKATVRQA LQDSRTEASA DESTDGSETT
SPAVSEKPTL KAKRIRPPVA PDTITPDAPF